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qs_1_scaffold_541

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_541_1
unknown

Not on your lists

comp(2..121)
DNA (120bp) protein (40aa)

This feature has no annotations

qs_1_scaffold_541_2
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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590..898
DNA (309bp) protein (103aa)
Amino acid permease-associated region n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LU64_HALLT
amino acid permease-associated region
Amino acid permease-associated region {ECO:0000313|EMBL:ACM58258.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacuspr
qs_1_scaffold_541_3
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1402..2790
DNA (1389bp) protein (463aa)
Amino acid transport protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P989_9EURY
Amino acid transport protein {ECO:0000313|EMBL:EMA66717.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 149
cat5; transport protein (probable substrate cationic amino acids)
qs_1_scaffold_541_4
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2836..3543)
DNA (708bp) protein (236aa)
UspA domain protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LSI5_HALLT
UspA domain protein
UspA domain protein {ECO:0000313|EMBL:ACM57932.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain ATC
qs_1_scaffold_541_5
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3605..4288)
DNA (684bp) protein (228aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1227465 species=
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18 3.2.2.-)
Endonuclease III n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DXW4_9EURY
qs_1_scaffold_541_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4400..5158)
DNA (759bp) protein (253aa)
Putative transcriptional regulator n=1 Tax=halophilic archaeon J07HX64 RepID=U1QRV7_9EURY
Putative transcriptional regulator {ECO:0000313|EMBL:ERH09918.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
putative transcriptional regulator
qs_1_scaffold_541_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5328..6254
DNA (927bp) protein (309aa)
UDP-glucose 4-epimerase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LD32_HALJP
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EMA30354.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
UDP-glucose 4-epimerase
qs_1_scaffold_541_8
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6270..6881)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X6G6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY57011.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical membrane protein
qs_1_scaffold_541_9
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7113..9086
DNA (1974bp) protein (658aa)
AMP-dependent synthetase and ligase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LEP7_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EMA32016.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi
AMP-forming long-chain acyl-CoA synthetase
qs_1_scaffold_541_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9194..9958
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR23_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24334.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_1_scaffold_541_11
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(10111..11325)
DNA (1215bp) protein (405aa)
ABC transporter n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CJA1_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ23316.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.;"
ABC-type multidrug transport system, ATPase and permease component
qs_1_scaffold_541_12
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(11322..12035)
DNA (714bp) protein (238aa)
ABC transporter n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BF21_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ09440.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 14624.;"
ABC-type multidrug transport system, ATPase and permease component
qs_1_scaffold_541_13
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12249..12902)
DNA (654bp) protein (218aa)
Uncharacterized protein n=3 Tax=Haloarcula RepID=V5TKT6_HALHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB65713.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
qs_1_scaffold_541_14
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(13034..13375)
DNA (342bp) protein (114aa)
Ferredoxin n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E8I7_9EURY
Ferredoxin {ECO:0000313|EMBL:ELZ43232.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 1137.;"
ferredoxin
qs_1_scaffold_541_15
unknown

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13635..14117
DNA (483bp) protein (161aa)

This feature has no annotations

qs_1_scaffold_541_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(14114..15424)
DNA (1311bp) protein (437aa)
amidohydrolase id=24645117 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Amidohydrolase {ECO:0000313|EMBL:ERH09338.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
amidohydrolase
qs_1_scaffold_541_17
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15578..16270
DNA (693bp) protein (231aa)
hypothetical protein; K06953 id=24648944 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Putative ICC-like phosphoesterase {ECO:0000313|EMBL:ERH10077.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
qs_1_scaffold_541_18
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16315..16965
DNA (651bp) protein (217aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114};; 2-deoxy-D-ribose 5-phosphate aldolase {E
Deoxyribose-phosphate aldolase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KPW3_HALAR
deoxyribose-phosphate aldolase
qs_1_scaffold_541_19
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16974..17957)
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1QWK3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10277.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
qs_1_scaffold_541_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18124..19380
DNA (1257bp) protein (419aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY52_9EURY
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:ELZ28161.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsba
MiaB-like tRNA modifying enzyme
qs_1_scaffold_541_21
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(19484..20476)
DNA (993bp) protein (331aa)
cation transporter n=1 Tax=Halomicrobium katesii RepID=UPI00038014A9
cation diffusion facilitator family transporter
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ACV47628.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomic
qs_1_scaffold_541_22
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20588..21406)
DNA (819bp) protein (273aa)
aldo/keto reductase family oxidoreductase id=24644500 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Diketogulonate related aldo/keto reductase {ECO:0000313|EMBL:ERH08723.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
aldo/keto reductase
qs_1_scaffold_541_23
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21457..21915)
DNA (459bp) protein (153aa)
Aspartate carbamoyltransferase regulatory chain n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXI0_HALMD
aspartate carbamoyltransferase regulatory subunit
Aspartate carbamoyltransferase regulatory chain {ECO:0000256|HAMAP-Rule:MF_00002}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" sourc
qs_1_scaffold_541_24
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21912..22826)
DNA (915bp) protein (305aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1085028 species="Ar
Aspartate carbamoyltransferase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PKS2_9EURY
aspartate carbamoyltransferase
qs_1_scaffold_541_25
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23049..23744
DNA (696bp) protein (232aa)
minD3; cell division inhibitor MinD-like protein; K03609 septum site-determining protein MinD id=24646554 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH10728.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
cobyrinic acid ac-diamide synthase
qs_1_scaffold_541_26
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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23795..24424
DNA (630bp) protein (210aa)
RecA-superfamily ATPase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIM8_9EURY
conserved hypothetical protein containing circadian clock protein KaiC/DNA repair protein RadA domain
RecA-superfamily ATPase protein {ECO:0000313|EMBL:ERJ07006.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ34776.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
qs_1_scaffold_541_27
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24598..25374
DNA (777bp) protein (259aa)
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase (EC:4.1.1.68)
5-oxopent-3-ene-1,2,5-tricarboxylatedecarboxylas e {ECO:0000313|EMBL:ACV48493.1}; EC=4.1.1.68 {ECO:0000313|EMBL:ACV48493.1};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
5-oxopent-3-ene-1,2,5-tricarboxylatedecarboxylas e n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NY33_HALMD
qs_1_scaffold_541_28
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(25392..27515)
DNA (2124bp) protein (708aa)
Rad24a/uvrB domain-containing protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0L1K0_9EURY
Rad24a/uvrB domain-containing protein {ECO:0000313|EMBL:EMA25880.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula am
DEAD/DEAH box helicase
Displaying 28 items

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