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qs_1_scaffold_2852

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_2852_1
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..161)
DNA (159bp) protein (53aa)
UPI0003D5D650 related cluster n=1 Tax=unknown RepID=UPI0003D5D650
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bac
30S ribosomal protein S7
qs_1_scaffold_2852_2
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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270..566
DNA (297bp) protein (99aa)
Peptide chain release factor 1 n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0IG46_9EURY
erf1; peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000313|EMBL:AFK20800.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (st
qs_1_scaffold_2852_3
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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665..943
DNA (279bp) protein (93aa)
50S ribosomal protein L44e n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3ADM3_9EURY
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1
ribosomal protein L44E
qs_1_scaffold_2852_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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945..1142
DNA (198bp) protein (66aa)
30S ribosomal protein S27e n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQ44_9EURY
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinen
30S ribosomal protein S27E
qs_1_scaffold_2852_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1224..2024
DNA (801bp) protein (267aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LBB4_HALJP
Translation initiation factor 2 subunit alpha {ECO:0000256|HAMAP-Rule:MF_00231}; aIF2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; eIF-2-alpha {ECO:0000256|HAMAP-Rule:MF_00231}; TaxID=1227453 species="Arc
eif2A; translation initiation factor IF-2 subunit alpha
qs_1_scaffold_2852_6
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2178..2360
DNA (183bp) protein (61aa)
Ribosome biogenesis protein Nop10 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D3A1_HALXS
ribosome biogenesis protein Nop10
Ribosome biogenesis protein Nop10 {ECO:0000256|HAMAP-Rule:MF_00803}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis
qs_1_scaffold_2852_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2364..3134
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L6N0_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA29252.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
3-isopropylmalate dehydratase
qs_1_scaffold_2852_8
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

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3612..6014
DNA (2403bp) protein (801aa)
Serine protease protein n=1 Tax=Rhodopirellula europaea 6C RepID=M2BB51_9PLAN
Serine protease protein {ECO:0000313|EMBL:EMB18888.1}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula eu
hypothetical protein
qs_1_scaffold_2852_9
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6065..7567)
DNA (1503bp) protein (501aa)
guaB; IMP dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0HC34_9EURY
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
qs_1_scaffold_2852_10
unknown

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7725..7991
DNA (267bp) protein (89aa)

This feature has no annotations

qs_1_scaffold_2852_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7998..8909
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N733_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52480.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_1_scaffold_2852_12
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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9030..9251
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W7C0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN02807.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
Displaying 12 items

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