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qs_1_scaffold_736

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_1_scaffold_736_1
unknown

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comp(173..526)
DNA (354bp) protein (118aa)

This feature has no annotations

qs_1_scaffold_736_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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844..1494
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Halococcus hamelinensis RepID=UPI000299E93E
Uncharacterized protein {ECO:0000313|EMBL:EMA53984.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_1_scaffold_736_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1693..2307)
DNA (615bp) protein (205aa)
30S ribosomal protein S7 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCA1_9EURY
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480, ECO:0000256|RuleBase:RU003621}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
30S ribosomal protein S7P
qs_1_scaffold_736_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2311..2739)
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU20_NATM8
rps12; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;
qs_1_scaffold_736_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2834..3304)
DNA (471bp) protein (157aa)
Transcription elongation factor NusA-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVX7_9EURY
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source=
NusA family KH domain protein
qs_1_scaffold_736_6
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3319..4557)
DNA (1239bp) protein (413aa)
rpoA''; DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'' {ECO:0000256|HAMAP-Rule:MF_00411}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00411};; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
DNA-directed RNA polymerase subunit A'' n=2 Tax=Haloarcula hispanica RepID=G0HSR2_HALHT
qs_1_scaffold_736_7
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4550..7507)
DNA (2958bp) protein (986aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
DNA-directed RNA polymerase subunit A n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GRB9_9EURY
DNA-directed RNA polymerase subunit A'
qs_1_scaffold_736_8
Halococcus sp. 197A, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7556..9382)
DNA (1827bp) protein (609aa)
rpoB; DNA-directed RNA polymerase subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=24646171 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1197130 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
qs_1_scaffold_736_9
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(9488..11053)
DNA (1566bp) protein (522aa)
DNA-directed RNA polymerase subunit B {ECO:0000313|EMBL:ELZ50928.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELZ50928.1};; TaxID=1227468 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacace
DNA-directed RNA polymerase subunit B n=4 Tax=Halorubrum RepID=M0D7L7_9EURY
DNA-directed RNA polymerase subunit beta''
qs_1_scaffold_736_10
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11050..11280)
DNA (231bp) protein (77aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit H n=1 Tax=Halobacterium sp. DL1 RepID=G4IAE4_9EURY
RNA polymerase Rpb5
qs_1_scaffold_736_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11442..11867)
DNA (426bp) protein (142aa)
Putative uncharacterized protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QTR2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91991.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
Protein of unknown function (DUF3257)
qs_1_scaffold_736_trna_1
unknown

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comp(11893..11965)
DNA (73bp)
transferRNA
qs_1_scaffold_736_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12141..12881)
DNA (741bp) protein (247aa)
Protein-L-isoaspartate(D-aspartate) O-methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUB7_9EURY
Protein-L-isoaspartate(D-aspartate) O-methyltransferase {ECO:0000313|EMBL:ELZ26821.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" sou
protein-L-isoaspartate O-methyltransferase
qs_1_scaffold_736_13
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13070..13759)
DNA (690bp) protein (230aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:M
pimT1; protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MTH6_HALMO
qs_1_scaffold_736_14
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13832..14410)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EG50_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ45867.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
hypothetical protein
Displaying 15 items

View Taxonomy