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qs_2_scaffold_3290

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_2_scaffold_3290_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..433
DNA (432bp) protein (144aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00587}; EC=2.1.1.257 {ECO:0000255|HAMAP-Rule:MF_00587};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobact
tRNA (pseudouridine(54)-N(1))-methyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=TRMY_NATPD
hypothetical protein
qs_2_scaffold_3290_trna_1
unknown

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564..636
DNA (73bp)
transferRNA
qs_2_scaffold_3290_2
unknown

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1267..1455
DNA (189bp) protein (63aa)

This feature has no annotations

qs_2_scaffold_3290_3
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1586..2473
DNA (888bp) protein (296aa)
Translation initiation factor aIF-2B subunit delta n=2 Tax=Haloarcula hispanica RepID=G0HXY1_HALHT
eif2BD2; translation initiation factor aIF-2B subunit delta
Translation initiation factor aIF-2B subunit alpha {ECO:0000313|EMBL:AHB66798.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="
qs_2_scaffold_3290_4
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2702..3337
DNA (636bp) protein (212aa)
Putative ArsR family regulatory protein n=3 Tax=Haloferax RepID=M0FNE7_9EURY
Putative ArsR family regulatory protein {ECO:0000313|EMBL:ELZ60828.1}; TaxID=1227464 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. AT
putative ArsR family regulatory protein
qs_2_scaffold_3290_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3337..4779
DNA (1443bp) protein (481aa)
Subtilase family protease n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L5U1_HALJP
Subtilase family protease {ECO:0000313|EMBL:EMA27814.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6
subtilase protease
qs_2_scaffold_3290_6
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4908..6002
DNA (1095bp) protein (365aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133, ECO:0000313|EMBL:ELZ45658.1};; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacter
trpB2; probable tryptophan synthase beta subunit (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EF17_9EURY
qs_2_scaffold_3290_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6289..6840
DNA (552bp) protein (184aa)
GCN5-related N-acetyltransferase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZ30_HALMD
N-acetyltransferase GCN5
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACV46716.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mu
qs_2_scaffold_3290_8
AR10, Diapherotrites, DPANN, Archaea

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6949..8031
DNA (1083bp) protein (361aa)
MscS family membrane protein YnaI
mechanosensitive ion channel protein MscS; K16052 MscS family membrane protein YnaI id=5241331 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
mechanosensitive ion channel protein MscS; K16052 MscS family membrane protein YnaI Tax=AR10
qs_2_scaffold_3290_9
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8105..8650
DNA (546bp) protein (182aa)
HhH-GPD superfamily base excision DNA repair protein (EC:3.2.2.21)
HhH-GPD family protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WUG0_9EURY
HhH-GPD family protein {ECO:0000313|EMBL:ELY52846.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 1879
qs_2_scaffold_3290_10
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8862..9026
DNA (165bp) protein (55aa)
Pyridoxal-5'-phosphate-dependent protein subunit beta n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PFX8_9EURY
Pyridoxal-5'-phosphate-dependent protein subunit beta {ECO:0000313|EMBL:EMA68813.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="H
pyridoxal-5'-phosphate-dependent protein subunit beta
qs_2_scaffold_3290_11
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9895..12222
DNA (2328bp) protein (776aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3EY47_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60167.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
peptidase S8/S53 subtilisin kexin sedolisin
qs_2_scaffold_3290_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12803..13720
DNA (918bp) protein (306aa)
LOR/SDH bifunctional protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6E1_9EURY
LOR/SDH bifunctional protein {ECO:0000313|EMBL:EMA41382.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensi
bifunctional protein LOR/SDH
qs_2_scaffold_3290_13
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(13717..13986)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D7N0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30843.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
qs_2_scaffold_3290_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14208..15503
DNA (1296bp) protein (432aa)
gcvP1; glycine dehydrogenase subunit 1 (EC:1.4.4.2)
Glycine cleavage system protein P alpha subunit {ECO:0000313|EMBL:CAI50389.1}; EC=1.4.4.2 {ECO:0000313|EMBL:CAI50389.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; H
Glycine dehydrogenase (Decarboxylating) (Glycine cleavage system protein P) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INB4_NATPD
Displaying 15 items

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