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qs_4_scaffold_2986

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_2986_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..132
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N416_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52288.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
qs_4_scaffold_2986_2
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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136..618
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NA00_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG93650.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
qs_4_scaffold_2986_3
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(643..1116)
DNA (474bp) protein (158aa)
Transposase (ISHnew96) n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M8Z2_9EURY
Transposase (ISHnew96) {ECO:0000313|EMBL:EMA42262.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM 1
transposase
qs_4_scaffold_2986_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1261..1503)
DNA (243bp) protein (81aa)
KEOPS complex Pcc1-like subunit n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CCY1_9EURY
KEOPS complex Pcc1-like subunit {ECO:0000313|EMBL:ELZ20222.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsba
rpo operon protein
qs_4_scaffold_2986_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1511..1645)
DNA (135bp) protein (45aa)
rpoP; DNA-directed RNA polymerase subunit P (EC:2.7.7.6)
DNA-directed RNA polymerase subunit P {ECO:0000256|HAMAP-Rule:MF_00615}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00615};; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit P n=2 Tax=Halococcus RepID=M0MY32_HALMO
qs_4_scaffold_2986_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1642..1920)
DNA (279bp) protein (93aa)
50S ribosomal protein L37Ae n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CEB5_9EURY
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
50S ribosomal protein L37a
qs_4_scaffold_2986_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1986..2711)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAF8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20225.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_2986_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2825..3289)
DNA (465bp) protein (155aa)
Histidine kinase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2Y2_HALMD
histidine kinase
Histidine kinase {ECO:0000313|EMBL:ACV47454.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
qs_4_scaffold_2986_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3510..4925)
DNA (1416bp) protein (472aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
Probable tRNA pseudouridine synthase D n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CCY6_9EURY
truD; tRNA pseudouridine synthase D
qs_4_scaffold_2986_10
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4989..5084)
DNA (96bp) protein (32aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Displaying 10 items

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