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qs_4_scaffold_178

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_178_1
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..178)
DNA (177bp) protein (59aa)
Transposase, IS605 OrfB family protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E5I0_9EURY
transposase, IS605 OrfB family
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:EMA23296.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula a
qs_4_scaffold_178_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(179..301)
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H803_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29933.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
qs_4_scaffold_178_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

740..1162
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZT5_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46843.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
qs_4_scaffold_178_4
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1227..2261)
DNA (1035bp) protein (345aa)
Peptidase M23 n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0E1Z2_9EURY
Peptidase M23 {ECO:0000313|EMBL:ELZ41038.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 14210.;"
peptidase M23
qs_4_scaffold_178_5
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2408..3295
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BI43_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ10541.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans D
hypothetical protein
qs_4_scaffold_178_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3306..4418)
DNA (1113bp) protein (371aa)
N2,N2-dimethylguanosine tRNA methyltransferase (EC:2.1.1.32)
tRNA (guanine(26)-N(2))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00290}; EC=2.1.1.216 {ECO:0000256|HAMAP-Rule:MF_00290};; tRNA 2,2-dimethylguanosine-26 methyltransferase {ECO:0000256|HAMAP-Rule:
N2,N2-dimethylguanosine tRNA methyltransferase n=1 Tax=Halomicrobium katesii RepID=UPI00037AD6BA
qs_4_scaffold_178_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4450..4866
DNA (417bp) protein (139aa)
Zinc finger SWIM domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZT7_HALMD
zinc finger SWIM domain-containing protein
Zinc finger SWIM domain protein {ECO:0000313|EMBL:ACV46845.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
qs_4_scaffold_178_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5001..6761
DNA (1761bp) protein (587aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00035E3942
PAS/PAC sensor signal transduction histidine kinase rbh
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:ACV46846.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" sourc
qs_4_scaffold_178_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6765..7409)
DNA (645bp) protein (215aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZT9_HALMD
hisH; imidazole glycerol phosphate synthase subunit HisH
qs_4_scaffold_178_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7575..8162)
DNA (588bp) protein (196aa)
DNA polymerase n=1 Tax=Halomicrobium katesii RepID=UPI000376EE6D
phage SPO1 DNA polymerase-related protein rbh
Phage SPO1 DNA polymerase-related protein {ECO:0000313|EMBL:ACV46848.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomic
qs_4_scaffold_178_11
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8199..8759)
DNA (561bp) protein (187aa)
UPF0215 protein C442_00812 n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0L1G5_9EURY
UPF0215 protein C442_00812 {ECO:0000256|HAMAP-Rule:MF_00582}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolyti
hypothetical protein
qs_4_scaffold_178_12
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9080..9688
DNA (609bp) protein (203aa)
Flavoprotein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0L0D9_9EURY
Flavoprotein {ECO:0000313|EMBL:EMA25485.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33799.;"
beta-lactamase
qs_4_scaffold_178_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9779..10396)
DNA (618bp) protein (206aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003698802
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47306.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_178_14
unknown

Not on your lists

10963..11103
DNA (141bp) protein (47aa)

This feature has no annotations

qs_4_scaffold_178_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11503..11652)
DNA (150bp) protein (50aa)
50S ribosomal protein L40e n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZU2_HALMD
50S ribosomal protein L40e
50S ribosomal protein L40e {ECO:0000256|HAMAP-Rule:MF_00788}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muko
qs_4_scaffold_178_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11745..12788
DNA (1044bp) protein (348aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00036823F3
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV46881.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_178_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12819..13328)
DNA (510bp) protein (170aa)
Probable ribosome biogenesis protein Hmuk_0749 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZX2_HALMD
hypothetical protein rbh
Probable ribosome biogenesis protein Hmuk_0749 {ECO:0000256|HAMAP-Rule:MF_01116}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source
qs_4_scaffold_178_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13418..14743
DNA (1326bp) protein (442aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZX1_HALMD
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen rbh
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ACV46879.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Ha
qs_4_scaffold_178_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14781..15116
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00035C7E7B
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46878.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_178_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15194..17359)
DNA (2166bp) protein (722aa)
amino acid transporter n=1 Tax=Halomicrobium katesii RepID=UPI000380DF11
amino acid permease rbh
Amino acid permease-associated region {ECO:0000313|EMBL:ACV46877.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;"
qs_4_scaffold_178_21
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17356..17787)
DNA (432bp) protein (144aa)
TrkA-N domain protein n=2 Tax=Halobacterium salinarum RepID=B0R565_HALS3
TrkA-N domain family protein {ECO:0000313|EMBL:AKH97886.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchae
sodium/proton antiporter, cpa1 family
qs_4_scaffold_178_22
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17909..18391)
DNA (483bp) protein (161aa)
Putative transcriptional regulator, AsnC family n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZW8_HALMD
AsnC family transcriptional regulator
Putative transcriptional regulator, AsnC family {ECO:0000313|EMBL:ACV46876.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="H
qs_4_scaffold_178_23
unknown

Not on your lists

18478..18591
DNA (114bp) protein (38aa)

This feature has no annotations

qs_4_scaffold_178_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18667..19077
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4Q7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29672.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_178_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19282..21306
DNA (2025bp) protein (675aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC34_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55416.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_4_scaffold_178_26
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21398..22780)
DNA (1383bp) protein (461aa)
seryl-tRNA synthetase (EC:6.1.1.11) rbh
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZW7_HALMD
qs_4_scaffold_178_27
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22928..23836
DNA (909bp) protein (303aa)
metallo-beta-lactamase n=1 Tax=Halomicrobium katesii RepID=UPI00037548F2
beta-lactamase rbh
Beta-lactamase domain protein {ECO:0000313|EMBL:ACV46871.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoh
qs_4_scaffold_178_28
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23902..25875
DNA (1974bp) protein (658aa)
AMP-dependent synthetase and ligase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M734_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EMA41622.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratir
AMP-forming long-chain acyl-CoA synthetase
qs_4_scaffold_178_29
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26031..27932
DNA (1902bp) protein (634aa)
potassium transporter n=1 Tax=Halomicrobium katesii RepID=UPI00037B496B
TrkA-N domain-containing protein rbh
TrkA-N domain protein {ECO:0000313|EMBL:ACV46870.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicr
qs_4_scaffold_178_30
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27988..28656)
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NU15_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV12260.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
Displaying items 1-30 of 44 in total

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