ggKbase home page

qs_4_scaffold_952

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_952_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..573)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IM11_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50857.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_4_scaffold_952_2
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(563..889)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NUC7_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV11024.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
qs_4_scaffold_952_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1352..2260)
DNA (909bp) protein (303aa)
RIO-type serine/threonine protein kinase n=1 Tax=Halomicrobium katesii RepID=UPI00035D1DEE
serine/threonine protein kinase rbh
Serine/threonine protein kinase {ECO:0000313|EMBL:ACV46333.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
qs_4_scaffold_952_4
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2680..2982
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGG4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ04613.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
qs_4_scaffold_952_5
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2979..3320
DNA (342bp) protein (114aa)
PilT domain protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGG5_9EURY
PilT domain protein
PilT domain protein {ECO:0000313|EMBL:CCQ33855.1}; PilT protein {ECO:0000313|EMBL:ERJ04614.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabd
qs_4_scaffold_952_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3414..4085)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003745EF6
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV46330.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_952_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4160..4498
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWI8_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46329.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_952_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4495..4914)
DNA (420bp) protein (140aa)
Thioesterase superfamily protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWI7_HALMD
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ACV46328.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mu
qs_4_scaffold_952_9
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4911..5441)
DNA (531bp) protein (177aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
peptide methionine sulfoxide reductase n=1 Tax=Halomicrobium katesii RepID=UPI0003822135
methionine sulfoxide reductase A rbh
qs_4_scaffold_952_10
CG_Delta_03, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5504..5713)
DNA (210bp) protein (70aa)
cation-transporting P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=CG_Delta_03
qs_4_scaffold_952_11
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5912..6733
DNA (822bp) protein (274aa)
Lpl n=1 Tax=Halomicrobium katesii RepID=UPI00036D60A3
biotin/lipoate A/B protein ligase rbh
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:ACV46324.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium m
qs_4_scaffold_952_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6759..7040)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWI2_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46323.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_952_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7171..8001
DNA (831bp) protein (277aa)
apurinic endonuclease Apn1 (EC:3.1.21.2)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA
endonuclease IV n=1 Tax=Halomicrobium katesii RepID=UPI00037F8C4B
qs_4_scaffold_952_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8105..8854
DNA (750bp) protein (250aa)
S-adenosylmethionine-dependent methyltransferase n=1 Tax=Halomicrobium katesii RepID=UPI00036AD911
methyltransferase type 11
Methyltransferase type 11 {ECO:0000313|EMBL:ACV46319.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohatae
qs_4_scaffold_952_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8826..9074)
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI0003658057
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46318.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_952_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9267..9692)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000379D04C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46317.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
qs_4_scaffold_952_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9752..10405)
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037AA55A
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV46316.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_952_18
unknown

Not on your lists

10434..10628
DNA (195bp) protein (65aa)

This feature has no annotations

qs_4_scaffold_952_19
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10714..11424
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWH2_HALMD
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV46313.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_952_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11477..12475
DNA (999bp) protein (333aa)
PP-loop domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWH1_HALMD
PP-loop domain-containing protein rbh
PP-loop domain protein {ECO:0000313|EMBL:ACV46312.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (
qs_4_scaffold_952_21
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12491..13081)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000363B300
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ACV46310.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
qs_4_scaffold_952_22
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13148..13735)
DNA (588bp) protein (196aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000364DB73
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46309.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_952_23
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14032..14169
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWG7_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46308.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
qs_4_scaffold_952_24
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14176..16275)
DNA (2100bp) protein (700aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWG6_HALMD
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACV46307.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_952_25
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16495..17718)
DNA (1224bp) protein (408aa)
Cell division protein FtsZ n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWG5_HALMD
cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobiu
qs_4_scaffold_952_26
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17703..17891)
DNA (189bp) protein (63aa)
Transcriptional regulator CopG family protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJJ5_9EURY
transcriptional regulator, CopG family
Transcriptional regulator CopG family protein {ECO:0000313|EMBL:ERJ05816.1}; Transcriptional regulator, CopG family {ECO:0000313|EMBL:CCQ34248.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Haloba
qs_4_scaffold_952_27
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18119..18712)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWG3_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46304.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
qs_4_scaffold_952_trna_1
unknown

Not on your lists

18918..18991
DNA (74bp)
transferRNA
qs_4_scaffold_952_28
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19401..20369)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YG68_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD53221.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
histidine kinase
qs_4_scaffold_952_29
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20519..20818
DNA (300bp) protein (100aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IBN9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05092.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
Displaying items 1-30 of 32 in total

View Taxonomy