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qs_4_scaffold_604

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_604_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..548
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N416_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52288.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_4_scaffold_604_2
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

552..1028
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1NA00_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG93650.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
qs_4_scaffold_604_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1732..3510
DNA (1779bp) protein (593aa)
beta-1,4-xylanase, family GH10 (EC:3.2.1.8)
Putative glycoside hydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNI3_9EURY
Putative glycoside hydrolase {ECO:0000313|EMBL:ELZ24188.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
qs_4_scaffold_604_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4236..5681
DNA (1446bp) protein (482aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
truD; tRNA pseudouridine synthase D (EC:4.2.1.-)
Probable tRNA pseudouridine synthase D n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CCY6_9EURY
qs_4_scaffold_604_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5733..6350)
DNA (618bp) protein (206aa)
tRNA (pseudouridine(54)-N(1))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00587}; EC=2.1.1.257 {ECO:0000256|HAMAP-Rule:MF_00587};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobact
tRNA (pseudouridine(54)-N(1))-methyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4F2_9EURY
hypothetical protein
qs_4_scaffold_604_6
unknown

Not on your lists

6432..6680
DNA (249bp) protein (83aa)

This feature has no annotations

qs_4_scaffold_604_7
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6673..6864
DNA (192bp) protein (64aa)
Membrane-bound metal-dependent hydrolase {ECO:0000313|EMBL:ELY90786.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwane
qs_4_scaffold_604_8
Aureococcus anophagefferens, Aureococcus, Pelagomonadales, Pelagophyceae, Eukaryota

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7050..9455
DNA (2406bp) protein (802aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens RepID=F0Y525_AURAN
Putative uncharacterized protein {ECO:0000313|EMBL:EGB09872.1}; Flags: Fragment;; TaxID=44056 species="Eukaryota; Stramenopiles; Pelagophyceae; Pelagomonadales; Aureococcus.;" source="Aureococcus anop
hypothetical protein
qs_4_scaffold_604_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9452..10450
DNA (999bp) protein (333aa)
GTP-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWK7_9EURY
GTP-binding protein {ECO:0000313|EMBL:ELZ26837.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
GTP-binding protein HSR1-related
qs_4_scaffold_604_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10593..11348)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUD0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26836.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_604_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11465..12760)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CUB0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26835.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_4_scaffold_604_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12896..13288
DNA (393bp) protein (131aa)
Putative heat shock protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWU0_9EURY
Putative heat shock protein {ECO:0000313|EMBL:ELZ27701.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadens
heat shock protein Hsp20
qs_4_scaffold_604_trna_1
unknown

Not on your lists

comp(13305..13406)
DNA (102bp)
transferRNA
qs_4_scaffold_604_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


13497..14915
DNA (1419bp) protein (473aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
CCA-adding enzyme (EC:2.7.7.72)
CCA-adding enzyme n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0F0_9EURY
qs_4_scaffold_604_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14994..16121)
DNA (1128bp) protein (376aa)
Histone deacetylase superfamily protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWK8_9EURY
Histone deacetylase superfamily protein {ECO:0000313|EMBL:ELZ27616.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
aup; acetoin utilization protein
qs_4_scaffold_604_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16121..16555)
DNA (435bp) protein (145aa)
Transcription factor CBF/NF-Y/histone domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYW7_9EURY
Transcription factor CBF/NF-Y/histone domain protein {ECO:0000313|EMBL:ELZ27617.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source
hstA; archaeal histone
qs_4_scaffold_604_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16675..18219)
DNA (1545bp) protein (515aa)
Replication factor A n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYC1_9EURY
Replication factor A {ECO:0000313|EMBL:ELZ27618.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1
rpa; replication factor A
qs_4_scaffold_604_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18651..19193)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0F5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27619.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
qs_4_scaffold_604_18
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19405..22314)
DNA (2910bp) protein (970aa)
ABC transporter n=2 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=L9UUW3_HALBP
ABC transporter {ECO:0000313|EMBL:ELY28715.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense (strain
ABC transporter
qs_4_scaffold_604_19
unknown

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comp(22417..22638)
DNA (222bp) protein (74aa)

This feature has no annotations

qs_4_scaffold_604_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22638..23105)
DNA (468bp) protein (156aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNP3_9EURY
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU004231}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
peptidylprolyl isomerase
qs_4_scaffold_604_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23183..24154)
DNA (972bp) protein (324aa)
Aldo/keto reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSP1_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:ELZ24889.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
aldo/keto reductase
qs_4_scaffold_604_22
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24309..24740
DNA (432bp) protein (144aa)
msrB1; peptide methionine sulfoxide reductase (R-form specific) (EC:1.8.4.11); K07305 peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12] id=24617941 bin=Halonotius_J07HN4 species=unknown genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
msrB; peptide methionine sulfoxide reductase msrB (EC:1.8.4.12)
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:ERH02112.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.
qs_4_scaffold_604_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24779..25396
DNA (618bp) protein (206aa)
Probable GTP-binding protein EngB n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D276_9EURY
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex c
small GTP-binding protein
qs_4_scaffold_604_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25536..26519
DNA (984bp) protein (328aa)
S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase {ECO:0000256|HAMAP-Rule:MF_01921}; EC=4.1.3.44 {ECO:0000256|HAMAP-Rule:MF_01921};; tRNA wyosine derivatives biosynthesis protein Taw1
tRNA-modifying enzyme n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0B3_9EURY
Wyosine base formation domain protein
qs_4_scaffold_604_25
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26723..27214
DNA (492bp) protein (164aa)
Riboflavin kinase {ECO:0000256|HAMAP-Rule:MF_01285}; Short=RFK {ECO:0000256|HAMAP-Rule:MF_01285};; EC=2.7.1.161 {ECO:0000256|HAMAP-Rule:MF_01285};; CTP-dependent riboflavin kinase {ECO:0000256|HAMAP-R
Riboflavin kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY20_9EURY
rib operon protein
qs_4_scaffold_604_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27249..27995
DNA (747bp) protein (249aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843};; TaxID=797114 species
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY05_9EURY
3,4-dihydroxy-2-butanone 4-phosphate synthase
qs_4_scaffold_604_27
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28099..28506
DNA (408bp) protein (136aa)
Blue (Type 1) copper domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0B7_9EURY
Blue (Type 1) copper domain-containing protein {ECO:0000313|EMBL:ELZ28112.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halo
halocyanin hcpC
qs_4_scaffold_604_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28637..29659)
DNA (1023bp) protein (341aa)
Sulfate/molybdate ABC transporter ATP-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1C7_9EURY
Sulfate/molybdate ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ29245.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" sourc
ABC-type transport system ATP-binding protein
qs_4_scaffold_604_29
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29659..30681)
DNA (1023bp) protein (341aa)
ABC-type spermidine/putrescine transport system, permease component II n=1 Tax=halophilic archaeon J07HB67 RepID=U1P709_9EURY
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:ERH12540.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic
binding-protein-dependent transporters inner membrane component
Displaying items 1-30 of 45 in total

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