ggKbase home page

qs_4_scaffold_1174_22

Organism: QS_4_Halobacteriales_70_21

partial RP 24 / 55 MC: 1 BSCG 21 / 51 MC: 4 ASCG 23 / 38 MC: 3
Location: comp(22788..23162)

Top 3 Functional Annotations

Value Algorithm Source
rpoF; DNA-directed RNA polymerase subunit F (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 77.1
  • Coverage: 118.0
  • Bit_score: 187
  • Evalue 2.00e-45
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:CAI49932.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI49932.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 118.0
  • Bit_score: 187
  • Evalue 9.80e-45
DNA-directed RNA polymerase subunit F n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPL8_NATPD similarity UNIREF
DB: UNIREF100
  • Identity: 77.1
  • Coverage: 118.0
  • Bit_score: 187
  • Evalue 7.00e-45

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Natronomonas pharaonis → Natronomonas → Halobacteriales → Halobacteria → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 375
ATGACGATCTTCAAGGAGGTCCGCGAGGAGGAGTACGTGACCACGCCCGAGGCCAAGGAGCTGTTAGCCGAGGTCGAAAGCCAGCGGGCCGAAGCCGACGAGCGGGAGATGCGATACGAACTCGCACGCGCAGTCGAGCACGTGAACCGGTTCGCCGTGCTGGACGTCGAGGGCTCGAGGGAGCTCGTCGAGGAGCTGCGGGACATAGAGAAGGTCGACGGGGCGACCGCCTACAAGGTCGCGAACCTCCTGCCGGCCGACCGGGACGAACTCCGGTCGGTGTTCGCCCAGGAGCGGTACTCGCTGGACGGCGACGAGCTGGACGAGGTCCTCGACGTCGTAGCGAAGTACGCCGAGACTGCCGGACGTGGCTGA
PROTEIN sequence
Length: 125
MTIFKEVREEEYVTTPEAKELLAEVESQRAEADEREMRYELARAVEHVNRFAVLDVEGSRELVEELRDIEKVDGATAYKVANLLPADRDELRSVFAQERYSLDGDELDEVLDVVAKYAETAGRG*