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qs_4_scaffold_1174

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_1174_1
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1..258
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y5C3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY68063.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
qs_4_scaffold_1174_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(404..1966)
DNA (1563bp) protein (521aa)
aspC3; pyridoxal phosphate-dependent aminotransferase (probable aspartate aminotransferase) (EC:2.6.1.-)
Pyridoxal phosphate-dependent aminotransferase (Probable aspartate aminotransferase) {ECO:0000313|EMBL:CCQ36136.1}; EC=2.6.1.- {ECO:0000313|EMBL:CCQ36136.1};; TaxID=268739 species="Archaea; Euryarchae
Pyridoxal phosphate-dependent aminotransferase (Probable aspartate aminotransferase) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPW2_NATM8
qs_4_scaffold_1174_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1963..2376)
DNA (414bp) protein (138aa)
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=2 Tax=Natronomonas pharaonis RepID=Q3INK6_NATPD
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
qs_4_scaffold_1174_4
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2631..4010
DNA (1380bp) protein (460aa)
NRAMP family Mn2+/Fe2+ transporter n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BJG5_9EURY
NRAMP family Mn2+/Fe2+ transporter {ECO:0000313|EMBL:ELZ11011.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM
Mn2+/Fe2_ transporter, NRAMP family
qs_4_scaffold_1174_5
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4229..4963)
DNA (735bp) protein (245aa)
GCN5-related N-acetyltransferase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DBU2_HALXS
GCN5-like N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AEH38848.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (str
qs_4_scaffold_1174_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5110..6846
DNA (1737bp) protein (579aa)
Homolog to membrane-bound mannosyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRL0_NATPD
purK operon protein
TIGR03663 family protein {ECO:0000313|EMBL:CAI49233.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (s
qs_4_scaffold_1174_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7084..7560)
DNA (477bp) protein (159aa)
apt_1; adenine phosphoribosyltransferase (EC:2.4.2.7)
HGPRTase-like protein {ECO:0000255|HAMAP-Rule:MF_01467}; EC=2.4.2.- {ECO:0000255|HAMAP-Rule:MF_01467};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
HGPRTase-like protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=HPRL_NATPD
qs_4_scaffold_1174_8
unknown

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comp(7615..8007)
DNA (393bp) protein (131aa)

This feature has no annotations

qs_4_scaffold_1174_9
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(8094..9950)
DNA (1857bp) protein (619aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZBG3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58000.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qs_4_scaffold_1174_10
unknown

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comp(9947..10420)
DNA (474bp) protein (158aa)

This feature has no annotations

qs_4_scaffold_1174_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10788..12476)
DNA (1689bp) protein (563aa)
Na+/H+ antiporter n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQR1_9EURY
Na+/H+ antiporter {ECO:0000313|EMBL:EFW93325.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX2
na+ antiporter
qs_4_scaffold_1174_12
unknown

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12862..13857
DNA (996bp) protein (332aa)

This feature has no annotations

qs_4_scaffold_1174_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13932..15026)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQU5_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI49499.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
qs_4_scaffold_1174_14
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15163..16203
DNA (1041bp) protein (347aa)
tyrS; tyrosine--tRNA ligase (EC:6.1.1.1)
Tyrosine--tRNA ligase {ECO:0000256|SAAS:SAAS00011232}; EC=6.1.1.1 {ECO:0000256|SAAS:SAAS00011232};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natro
Tyrosine--tRNA ligase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRV4_NATM8
qs_4_scaffold_1174_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16856..17968)
DNA (1113bp) protein (371aa)
metE_1; methionine synthase (EC:2.1.1.14)
Methionine synthase {ECO:0000256|HAMAP-Rule:MF_00288}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00288};; Homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00288}; TaxID=348780 species="Archaea; E
Probable methylcobalamin:homocysteine methyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPM4_NATPD
qs_4_scaffold_1174_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17965..18951)
DNA (987bp) protein (329aa)
metE_2; 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC:2.1.1.14)
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (Methionine synthase II) {ECO:0000313|EMBL:CAI49927.1}; EC=2.1.1.14 {ECO:0000313|EMBL:CAI49927.1};; TaxID=348780 species="Archae
5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase (Methionine synthase II) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPM3_NATPD
qs_4_scaffold_1174_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18992..19570)
DNA (579bp) protein (193aa)
Protein N5-glutamine methyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPM2_NATPD
hemK; protein methyltransferase
Protein N5-glutamine methyltransferase {ECO:0000313|EMBL:CAI49928.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomona
qs_4_scaffold_1174_18
Tetrahymena thermophila, Tetrahymena, Hymenostomatida, Oligohymenophorea, Eukaryota

Not on your lists

comp(19567..19974)
DNA (408bp) protein (136aa)
TAP1 protein n=2 Tax=Tetrahymena thermophila RepID=O77406_TETTH
hypothetical protein
TAP1 protein {ECO:0000313|EMBL:CAA53731.1}; TaxID=5911 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Hymenostomatida; Tetrahymenina; Tetrahymenidae; Tetrahymena.;"
qs_4_scaffold_1174_19
unknown

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20190..20447
DNA (258bp) protein (86aa)

This feature has no annotations

qs_4_scaffold_1174_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(21418..22080)
DNA (663bp) protein (221aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000255|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000255|HAMAP-Rul
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RSMA_NATPD
ksgA; dimethyladenosine transferase
qs_4_scaffold_1174_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22134..22709)
DNA (576bp) protein (192aa)
Putative tRNA-specific adenosine deaminase {ECO:0000313|EMBL:CAI49931.1}; EC=3.5.4.- {ECO:0000313|EMBL:CAI49931.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
Putative tRNA-specific adenosine deaminase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPL9_NATPD
hypothetical protein
qs_4_scaffold_1174_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22788..23162)
DNA (375bp) protein (125aa)
rpoF; DNA-directed RNA polymerase subunit F (EC:2.7.7.6)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:CAI49932.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI49932.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
DNA-directed RNA polymerase subunit F n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPL8_NATPD
qs_4_scaffold_1174_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(23159..23452)
DNA (294bp) protein (98aa)
50S ribosomal protein L21e n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL21_NATPD
rpl21R; 50S ribosomal protein L21e
50S ribosomal protein L21e {ECO:0000255|HAMAP-Rule:MF_00369}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharao
qs_4_scaffold_1174_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23692..23958)
DNA (267bp) protein (89aa)
Elongation factor 1-beta n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=EF1B_NATPD
ef1B; elongation factor 1-beta
Elongation factor 1-beta {ECO:0000255|HAMAP-Rule:MF_00043}; Short=EF-1-beta {ECO:0000255|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000255|HAMAP-Rule:MF_00043}; TaxID=348780 species="Archaea; Euryarchaeot
qs_4_scaffold_1174_25
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23961..24143)
DNA (183bp) protein (61aa)
Small CPxCG-related zinc finger protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRN8_NATM8
small CPxCG-related zinc finger protein
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CCQ36888.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
qs_4_scaffold_1174_26
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24312..24518
DNA (207bp) protein (69aa)
tRNA(Met) cytidine acetyltransferase TmcA {ECO:0000256|HAMAP-Rule:MF_01886}; EC=2.3.1.193 {ECO:0000256|HAMAP-Rule:MF_01886};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
Displaying 26 items

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