ggKbase home page

qs_4_scaffold_3691

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_4_scaffold_3691_1
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..373)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QP76_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93992.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_4_scaffold_3691_2
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

473..811
DNA (339bp) protein (113aa)
Glutaredoxin n=1 Tax=Halogranum salarium B-1 RepID=J3JCS1_9EURY
Glutaredoxin {ECO:0000313|EMBL:EJN56861.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
qs_4_scaffold_3691_3
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1118..1252)
DNA (135bp) protein (45aa)
DNA-directed RNA polymerase subunit p (EC:2.7.7.6)
DNA-directed RNA polymerase subunit P {ECO:0000256|HAMAP-Rule:MF_00615}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00615};; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
DNA-directed RNA polymerase subunit P n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NSL7_HALBP
qs_4_scaffold_3691_4
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1284..1556)
DNA (273bp) protein (91aa)
50S ribosomal protein L37Ae n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NSL6_HALBP
50S ribosomal protein L37ae
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halo
qs_4_scaffold_3691_5
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1677..2732)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V1L9_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV46583.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
qs_4_scaffold_3691_6
unknown

Not on your lists

comp(2787..2987)
DNA (201bp) protein (67aa)

This feature has no annotations

qs_4_scaffold_3691_7
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3215..4648)
DNA (1434bp) protein (478aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
Probable tRNA pseudouridine synthase D n=1 Tax=Natrinema gari JCM 14663 RepID=L9YPP7_9EURY
tRNA pseudouridine synthase D TruD
qs_4_scaffold_3691_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4839..5177)
DNA (339bp) protein (113aa)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:ESP89680.1}; EC=3.1.1.29 {ECO:0000313|EMBL:ESP89680.1};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candi
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HG37_9EURY
qs_4_scaffold_3691_9
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5337..6095
DNA (759bp) protein (253aa)
Probable deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146, ECO:0000313|EMBL
Probable deoxycytidine triphosphate deaminase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VKZ5_9EURY
deoxycytidine triphosphate deaminase
qs_4_scaffold_3691_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6092..7042
DNA (951bp) protein (317aa)
Phosphomethylpyrimidine kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQH0_9EURY
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EMA46725.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
phosphomethylpyrimidine kinase
qs_4_scaffold_3691_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7082..7786
DNA (705bp) protein (235aa)
Methyltransferase type 11 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSM5_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:EMA36537.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 1
Methyltransferase type 11
qs_4_scaffold_3691_12
unknown

Not on your lists

comp(7938..8267)
DNA (330bp) protein (110aa)

This feature has no annotations

qs_4_scaffold_3691_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8472..8639)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NAZ4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55006.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_4_scaffold_3691_14
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8766..9098
DNA (333bp) protein (111aa)
Formyl-CoA transferase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3N0_HALJB
Formyl-CoA transferase
Formyl-CoA transferase {ECO:0000313|EMBL:ADJ15337.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali
Displaying 14 items

View Taxonomy