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qs_5_scaffold_352

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_5_scaffold_352_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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21..512
DNA (492bp) protein (164aa)
50S ribosomal protein L22P n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWC8_9EURY
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
50S ribosomal protein L17e (L22p)
qs_5_scaffold_352_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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512..1492
DNA (981bp) protein (327aa)
30S ribosomal protein S3 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CKJ1_9EURY
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
30S ribosomal protein S3e (S3p)
qs_5_scaffold_352_3

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1489..1707
DNA (219bp) protein (73aa)
LSU ribosomal protein L29P n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y8E5_9ARCH
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
rpl29; 50S ribosomal protein L29
qs_5_scaffold_352_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1709..2008
DNA (300bp) protein (100aa)
rnp1; ribonuclease P protein component 1 (EC:3.1.26.5)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|H
Ribonuclease P protein component 1 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP54_NATM8
qs_5_scaffold_352_5

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1999..2355
DNA (357bp) protein (119aa)
30S ribosomal protein S17P n=1 Tax=halophilic archaeon DL31 RepID=G2MM79_9ARCH
30S ribosomal protein S17
Ribosomal protein S17P {ECO:0000313|EMBL:AEN06126.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_5_scaffold_352_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2355..2753
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL14_NATPD
rpl14; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
qs_5_scaffold_352_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2750..3115
DNA (366bp) protein (122aa)
50S ribosomal protein L24P n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP64_NATM8
rpl24; 50S ribosomal protein L24
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
qs_5_scaffold_352_8
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3112..3894
DNA (783bp) protein (261aa)
30S ribosomal protein S4e n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8Y0_9EURY
30S ribosomal protein S4e
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht
qs_5_scaffold_352_9
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3891..4421
DNA (531bp) protein (177aa)
50S ribosomal protein L5 n=5 Tax=Haloarcula RepID=G0HW39_HALHT
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica
qs_5_scaffold_352_10
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4421..4603
DNA (183bp) protein (61aa)
30S ribosomal protein S14 type Z n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X706_9EURY
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobi
rps14P; 30S ribosomal protein S14P
qs_5_scaffold_352_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4605..4997
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS8_NATPD
rps8p; 30S ribosomal protein S8P
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
qs_5_scaffold_352_12
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4999..5535
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4D6_HALMD
rpl6p; 50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukoha
qs_5_scaffold_352_13
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5535..6380
DNA (846bp) protein (282aa)
50S ribosomal protein L32e n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DDG2_9EURY
50S ribosomal protein L32e {ECO:0000313|EMBL:ELZ33501.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidu
50S ribosomal protein L32e
qs_5_scaffold_352_14
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6377..6835
DNA (459bp) protein (153aa)
50S ribosomal protein L19e n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP43_NATM8
rpl19e; 50S ribosomal protein L19e
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
qs_5_scaffold_352_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


6835..7386
DNA (552bp) protein (184aa)
50S ribosomal protein L18P n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL18_NATPD
rpl18p; 50S ribosomal protein L18P
50S ribosomal protein L18 {ECO:0000255|HAMAP-Rule:MF_01337}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
qs_5_scaffold_352_16
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7388..8029
DNA (642bp) protein (214aa)
30S ribosomal protein S5 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZT6_9EURY
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihal
ribosomal protein S5/S2
qs_5_scaffold_352_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


8029..8493
DNA (465bp) protein (155aa)
50S ribosomal protein L30P n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP56_NATM8
rpl30; 50S ribosomal protein L30
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
qs_5_scaffold_352_18
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8490..8993
DNA (504bp) protein (168aa)
50S ribosomal protein L15P n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUI8_9EURY
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinens
50S ribosomal protein L15
qs_5_scaffold_352_19
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8995..10479
DNA (1485bp) protein (495aa)
Protein translocase subunit SecY n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP42_NATM8
secY; protein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Protein transport protein SEC61 subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=268739
qs_5_scaffold_352_20
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10947..11777
DNA (831bp) protein (277aa)
Peptidase M50 n=1 Tax=Halobacterium sp. DL1 RepID=G4IIM7_9EURY
Metalloprotease {ECO:0000313|EMBL:AHG02952.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
peptidase M50
qs_5_scaffold_352_21
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11717..11902
DNA (186bp) protein (62aa)
Peptidase M50 n=1 Tax=Halobacterium sp. DL1 RepID=G4IIM7_9EURY
Metalloprotease {ECO:0000313|EMBL:AHG02952.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
peptidase M50
qs_5_scaffold_352_22
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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11985..13970
DNA (1986bp) protein (662aa)
ABC transporter ATP-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D2X6_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ29881.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricu
ABC-type transport system ATP-binding/permease protein
qs_5_scaffold_352_23
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14624..16285)
DNA (1662bp) protein (554aa)
Alpha amylase catalytic region n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NXH4_9EURY
Alpha amylase catalytic region {ECO:0000313|EMBL:EMA61959.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum D
alpha amylase catalytic region rbh
qs_5_scaffold_352_24
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(16506..16853)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HLN9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ESP88814.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
zinc finger CHY domain-containing protein
qs_5_scaffold_352_25
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(17094..17855)
DNA (762bp) protein (254aa)
Putative amidase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXK0_9EURY
Putative amidase {ECO:0000313|EMBL:EFW91003.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX25
amidase
qs_5_scaffold_352_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(17959..19026)
DNA (1068bp) protein (356aa)
Proline racemase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NG13_9EURY
Proline racemase {ECO:0000313|EMBL:EMA55625.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
proline racemase
qs_5_scaffold_352_27

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comp(19419..20522)
DNA (1104bp) protein (368aa)
muconate-lactonizing protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4B6CE
Uncharacterized protein {ECO:0000313|EMBL:KKK89581.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Mandelate racemase/muconate lactonizing protein
qs_5_scaffold_352_28
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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20658..21806
DNA (1149bp) protein (383aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SVJ9_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:EFW92961.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihal
glycine/D-amino acid oxidase, deaminating
Displaying 28 items

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