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qs_9_scaffold_3856

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_3856_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..231
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBW5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55048.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_9_scaffold_3856_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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691..1215
DNA (525bp) protein (175aa)
Transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM48_9EURY
Transcriptional regulator {ECO:0000313|EMBL:EMA55655.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
hypothetical protein
qs_9_scaffold_3856_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1270..1869)
DNA (600bp) protein (200aa)
Transcription regulator n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCT4_9EURY
Transcription regulator {ECO:0000313|EMBL:EMA55656.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
transcriptional regulator
qs_9_scaffold_3856_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2188..3087)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCG3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55657.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
stomatin-prohibitin-like protein
qs_9_scaffold_3856_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3166..3777)
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPV8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46769.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_9_scaffold_3856_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3923..4153)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN10_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46768.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
qs_9_scaffold_3856_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(4195..6180)
DNA (1986bp) protein (662aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1227455 species="Archaea;
metS; methionine--tRNA ligase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM63_9EURY
qs_9_scaffold_3856_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6597..7196)
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQK5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46765.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
conserved hypothetical membrane protein, SNARE-associated Golgi protein family
qs_9_scaffold_3856_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7234..8316)
DNA (1083bp) protein (361aa)
L-tyrosine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01610}; Short=TDC {ECO:0000256|HAMAP-Rule:MF_01610};; EC=4.1.1.25 {ECO:0000256|HAMAP-Rule:MF_01610};; TaxID=1227455 species="Archaea; Euryarchaeota;
L-tyrosine decarboxylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MPV4_9EURY
L-tyrosine decarboxylase
qs_9_scaffold_3856_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8397..10589)
DNA (2193bp) protein (731aa)
Phosphoenolpyruvate synthase {ECO:0000256|PIRNR:PIRNR000854}; Short=PEP synthase {ECO:0000256|PIRNR:PIRNR000854};; EC=2.7.9.2 {ECO:0000256|PIRNR:PIRNR000854};; Pyruvate, water dikinase {ECO:0000256|PI
ppsA; phosphoenolpyruvate synthase (EC:2.7.9.2)
Phosphoenolpyruvate synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM41_9EURY
qs_9_scaffold_3856_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10704..11606)
DNA (903bp) protein (301aa)
Phenazine biosynthesis protein PhzF family n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDN5_9EURY
Phenazine biosynthesis protein PhzF family {ECO:0000313|EMBL:EMA55668.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
phenazine biosynthesis protein PhzF family
qs_9_scaffold_3856_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11632..11976)
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEZ7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55669.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
qs_9_scaffold_3856_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12209..12340
DNA (132bp) protein (44aa)
Purine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01963};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01963};; TaxID=1227455 species="Archaea; Euryarch
Purine nucleoside phosphorylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQJ5_9EURY
qs_9_scaffold_3856_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12361..12978
DNA (618bp) protein (206aa)
Purine nucleoside phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01963};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01963};; TaxID=1227456 species="Archaea; Euryarch
Purine nucleoside phosphorylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCU1_9EURY
methylthioadenosine phosphorylase
qs_9_scaffold_3856_15
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13079..14107)
DNA (1029bp) protein (343aa)
Zinc-binding dehydrogenase family oxidoreductase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSP3_9EURY
Zinc-binding dehydrogenase family oxidoreductase {ECO:0000313|EMBL:EMA36562.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
alcohol dehydrogenase
qs_9_scaffold_3856_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14298..15107)
DNA (810bp) protein (270aa)
Chromosome segregation and condensation protein ScpA n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NFB5_9EURY
Chromosome segregation and condensation protein ScpA {ECO:0000313|EMBL:EMA55385.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
chromosome segregation and condensation protein ScpA
qs_9_scaffold_3856_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15100..15882)
DNA (783bp) protein (261aa)
Chromosome partition protein Smc n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM32_9EURY
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
chromosome segregation protein SMC
qs_9_scaffold_3856_18
unknown

Not on your lists

16588..18891
DNA (2304bp) protein (768aa)

This feature has no annotations

qs_9_scaffold_3856_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19268..19801
DNA (534bp) protein (178aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCU7_9EURY
Displaying 19 items

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