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qs_9_scaffold_5062

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_5062_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3..350
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWZ5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36615.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
qs_9_scaffold_5062_trna_1
unknown

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396..480
DNA (85bp)
transferRNA
qs_9_scaffold_5062_2
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(507..899)
DNA (393bp) protein (131aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M7T9_9EURY
PilT protein domain-containing protein
qs_9_scaffold_5062_3

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comp(883..1128)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZS04_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS05515.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
qs_9_scaffold_5062_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1244..1630
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMQ3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46648.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_9_scaffold_5062_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1681..2181
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NFL2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55470.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_9_scaffold_5062_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2198..2887)
DNA (690bp) protein (230aa)
TrkA-N domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQA3_9EURY
TrkA-N domain-containing protein {ECO:0000313|EMBL:EMA46650.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacchar
TrkA-N domain-containing protein
qs_9_scaffold_5062_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2919..3893)
DNA (975bp) protein (325aa)
oxdhA2; Pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component subunit alpha n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0ND31_9EURY
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000313|EMBL:EMA55468.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
qs_9_scaffold_5062_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3965..4291
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBX2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55467.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
qs_9_scaffold_5062_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4515..5192
DNA (678bp) protein (226aa)
DNA binding domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC97_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EMA55466.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
DNA binding domain-containing protein
qs_9_scaffold_5062_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5531..6124)
DNA (594bp) protein (198aa)
Probable thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=1227456 species="Archaea; Euryarchaeo
tmk; thymidylate kinase (EC:2.7.4.9)
Probable thymidylate kinase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEF4_9EURY
qs_9_scaffold_5062_11
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6202..6603)
DNA (402bp) protein (134aa)
Uncharacterized protein n=3 Tax=Halorubrum RepID=M0DQP3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ45763.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 9100
hypothetical protein
qs_9_scaffold_5062_12
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6600..6869)
DNA (270bp) protein (90aa)
AbrB family transcription regulator id=24630686 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Looped-hinge helix DNA binding domain, AbrB family {ECO:0000313|EMBL:ERG92979.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="H
AbrB family transcription regulator
qs_9_scaffold_5062_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7018..7905
DNA (888bp) protein (296aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0ND28_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EMA55463.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sali
NAD-dependent epimerase/dehydratase
qs_9_scaffold_5062_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7989..8639
DNA (651bp) protein (217aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=122745
2-phospho-L-lactate guanylyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBW7_9EURY
phospholactate guanylyltransferase
qs_9_scaffold_5062_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8781..8918
DNA (138bp) protein (46aa)
FO synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}; EC=2.5.1.77 {ECO:0000256|HAMAP-Rule:MF_01611};; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}
Displaying 16 items

View Taxonomy