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qs_9_scaffold_4284

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_4284_1
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..1190)
DNA (1188bp) protein (396aa)
tRNA pseudouridine synthase D; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=24613823 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
hypothetical protein
qs_9_scaffold_4284_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1190..1534)
DNA (345bp) protein (115aa)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:EMA54080.1}; EC=3.1.1.29 {ECO:0000313|EMBL:EMA54080.1};; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NBP1_9EURY
qs_9_scaffold_4284_3
unknown

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1735..2115
DNA (381bp) protein (127aa)

This feature has no annotations

qs_9_scaffold_4284_4

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2844..4925
DNA (2082bp) protein (694aa)
Deoxycytidine triphosphate deaminase n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y9D0_9ARCH
Deoxycytidine triphosphate deaminase {ECO:0000313|EMBL:ESS09416.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
deoxycytidine triphosphate deaminase
qs_9_scaffold_4284_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4922..6028
DNA (1107bp) protein (369aa)
DNA binding protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4J2P9_9EURY
DNA binding protein {ECO:0000313|EMBL:ESP89677.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum
hypothetical protein
qs_9_scaffold_4284_6
unknown

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comp(5968..6366)
DNA (399bp) protein (133aa)

This feature has no annotations

qs_9_scaffold_4284_7

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comp(6814..6972)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZWW3_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS07470.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
small CPxCG-related zinc finger protein
qs_9_scaffold_4284_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7017..8168
DNA (1152bp) protein (384aa)
glutathione S-transferase (EC:2.5.1.18)
Glutathione transferase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HIQ3_9EURY
Glutathione transferase {ECO:0000313|EMBL:ESP89673.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
qs_9_scaffold_4284_9
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8231..9187)
DNA (957bp) protein (319aa)
dmt(drug/metabolite transporter) superfamily permease id=24613812 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Dmt(Drug/metabolite transporter) superfamily permease {ECO:0000313|EMBL:ESP89671.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonu
dmt(drug/metabolite transporter) superfamily permease
qs_9_scaffold_4284_10
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9402..10232
DNA (831bp) protein (277aa)
transcriptional regulator id=24613811 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Transcriptional regulator {ECO:0000313|EMBL:ESP89670.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halo
transcriptional regulator
qs_9_scaffold_4284_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10410..11480
DNA (1071bp) protein (357aa)
aspartate transaminase (EC:2.6.1.1)
aspartate/tyrosine/aromatic aminotransferase id=24613807 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Aspartate transaminase {ECO:0000313|EMBL:ESP89666.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobon
qs_9_scaffold_4284_12
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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11637..12086
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WMX0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY49688.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
transposase, IS605 OrfB family, central region
Displaying 12 items

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