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qs_9_scaffold_1279

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_1279_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..534
DNA (534bp) protein (178aa)
TATA-box-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1A7_9EURY
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {E
transcription factor TFIID
qs_9_scaffold_1279_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

574..963
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4W9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29224.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
qs_9_scaffold_1279_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1224..1679)
DNA (456bp) protein (152aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
ATP phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00079}; Short=ATP-PRT {ECO:0000256|HAMAP-Rule:MF_00079};; Short=ATP-PRTase {ECO:0000256|HAMAP-Rule:MF_00079};; EC=2.4.2.17 {ECO:0000256|HAMAP-R
ATP phosphoribosyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XYX5_NATM8
qs_9_scaffold_1279_4
unknown

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comp(2039..2425)
DNA (387bp) protein (129aa)

This feature has no annotations

qs_9_scaffold_1279_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2503..3492
DNA (990bp) protein (330aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC
5-methylthioadenosine/S-adenosylhomocysteine deaminase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QN27_9EURY
amidohydrolase
qs_9_scaffold_1279_6
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3736..4446
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LMT4_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA34816.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
qs_9_scaffold_1279_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4544..5842
DNA (1299bp) protein (433aa)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHU5_9EURY
qs_9_scaffold_1279_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6130..6621
DNA (492bp) protein (164aa)
Holliday junction resolvase Hjc {ECO:0000256|HAMAP-Rule:MF_01490}; Short=Hjc {ECO:0000256|HAMAP-Rule:MF_01490};; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_01490};; TaxID=348780 species="Archaea; Euryarch
Holliday junction resolvase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITV2_NATPD
hjc; Holliday junction resolvase
qs_9_scaffold_1279_9
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6632..7336
DNA (705bp) protein (235aa)
Purine or other phosphorylase family 1 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXN5_9EURY
Purine or other phosphorylase family 1 {ECO:0000313|EMBL:EFW90586.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatu
hypothetical protein
qs_9_scaffold_1279_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7383..8015)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D353_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29283.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
zinc finger SWIM domain-containing protein
qs_9_scaffold_1279_11
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8095..8487)
DNA (393bp) protein (131aa)
PilT protein domain-containing protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JNU6_9EURY
PilT protein domain-containing protein {ECO:0000313|EMBL:EMA09639.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula ca
hypothetical protein
qs_9_scaffold_1279_12
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8484..8759)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JMR8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA09638.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
hypothetical protein
qs_9_scaffold_1279_13

Not on your lists

9046..9246
DNA (201bp) protein (67aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MMS7_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN06625.1}; Flags: Precursor;; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_9_scaffold_1279_14

Not on your lists

9473..10315
DNA (843bp) protein (281aa)
ribose-5-phosphate isomerase A (EC:5.3.1.6)
Ribose-5-phosphate isomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; EC=5.3.1.6 {ECO:0000256|HAMAP-Rule:MF_00170};; Phosphoriboisomerase A {ECO:0000256|HAMAP-Rule:MF_00170}; TaxID=756883 species="Archaea
Ribose-5-phosphate isomerase A n=1 Tax=halophilic archaeon DL31 RepID=G2MHG7_9ARCH
qs_9_scaffold_1279_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10494..11267
DNA (774bp) protein (258aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CZA5_9EURY
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase {ECO:0000313|EMBL:ELZ27772.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Hal
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase
qs_9_scaffold_1279_16
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11356..11511
DNA (156bp) protein (52aa)
Small CPxCG-related zinc finger protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XMW2_NATM8
small CPxCG-related zinc finger protein
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CCQ35227.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
qs_9_scaffold_1279_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11560..11805
DNA (246bp) protein (82aa)
UPF0213 protein NP_0776A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Y776_NATPD
hypothetical protein
UPF0213 protein NP_0776A; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) (
qs_9_scaffold_1279_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11832..12539
DNA (708bp) protein (236aa)
DNA topoisomerase type IA zn finger domain protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCU4_9EURY
DNA topoisomerase type IA zn finger domain protein {ECO:0000313|EMBL:EMA43168.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
DNA topoisomerase type IA Zn finger domain protein
qs_9_scaffold_1279_19
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12571..13614
DNA (1044bp) protein (348aa)
endA; tRNA splicing endonuclease (EC:3.1.27.9)
tRNA-splicing endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; EC=4.6.1.16 {ECO:0000256|HAMAP-Rule:MF_01834};; tRNA-intron endonuclease {ECO:0000256|HAMAP-Rule:MF_01834}; TaxID=634497 species="Archaea;
tRNA-splicing endonuclease n=2 Tax=Haloarcula hispanica RepID=G0HRM4_HALHT
qs_9_scaffold_1279_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13620..14165)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43171.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
qs_9_scaffold_1279_21
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14850..16430
DNA (1581bp) protein (527aa)
Tryptophan--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00140}; EC=6.1.1.2 {ECO:0000256|HAMAP-Rule:MF_00140};; Tryptophanyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00140}; TaxID=1592728 species="Archaea
Tryptophan--tRNA ligase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KY46_9EURY
tryptophanyl-tRNA synthetase
qs_9_scaffold_1279_22
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


16719..18224
DNA (1506bp) protein (502aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000313|EMBL:CAI48439.1}; EC=6.1.1.20 {ECO:0000313|EMBL:CAI48439.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITU4_NATPD
qs_9_scaffold_1279_23
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


18224..20056
DNA (1833bp) protein (611aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284, ECO:0000313|EMBL:ELY78613.1};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z0C2_9EURY
phenylalanyl-tRNA synthetase subunit beta
qs_9_scaffold_1279_24
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20077..21168)
DNA (1092bp) protein (364aa)
Dihydroorotate dehydrogenase 2 {ECO:0000313|EMBL:EMA68515.1}; EC=1.3.98.1 {ECO:0000313|EMBL:EMA68515.1};; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
dihydroorotate dehydrogenase 2 (EC:1.3.3.1)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PIG5_9EURY
qs_9_scaffold_1279_25
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(21165..21362)
DNA (198bp) protein (66aa)
hypothetical protein id=24616145 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP87971.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
qs_9_scaffold_1279_26
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21576..21881
DNA (306bp) protein (102aa)
Non-histone chromosomal MC1 family protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W9Y9_9EURY
Non-histone chromosomal MC1 family protein {ECO:0000313|EMBL:ELY46279.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubr
Non-histone chromosomal MC1 family protein
qs_9_scaffold_1279_16S_1
unknown

Not on your lists

22607..23517
DNA (911bp)
Displaying 27 items

View Taxonomy