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qs_9_scaffold_2613

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_2613_1
unknown

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comp(2..133)
DNA (132bp) protein (44aa)

This feature has no annotations

qs_9_scaffold_2613_2
Chroococcales cyanobacterium CENA595, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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comp(542..871)
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Scytonema hofmanni RepID=UPI0003496796
Low temperature requirement protein A {ECO:0000313|EMBL:KJH69490.1}; TaxID=1618023 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales.;" source="Chroococcales cyanobacterium CENA59
qs_9_scaffold_2613_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(835..1725)
DNA (891bp) protein (297aa)
Low temperature requirement A n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LVY1_9EURY
Low temperature requirement A {ECO:0000313|EMBL:EMA37616.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinens
low temperature requirement A
qs_9_scaffold_2613_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1980..2762)
DNA (783bp) protein (261aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
psmB; proteasome beta subunit (EC:3.4.25.1)
Proteasome subunit beta n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4P9_9EURY
qs_9_scaffold_2613_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2762..3508)
DNA (747bp) protein (249aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
psmA4; proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QYM1_9EURY
qs_9_scaffold_2613_6
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3873..4193
DNA (321bp) protein (107aa)
UV-damage endonuclease n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y6V2_9ARCH
UV damage endonuclease UvdE {ECO:0000313|EMBL:ERH02852.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
uvdE; UV DNA damage endonuclease
qs_9_scaffold_2613_7
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4190..4783
DNA (594bp) protein (198aa)
uvsE; UV damage endonuclease (EC:3.-.-.-); K13281 UV DNA damage endonuclease [EC:3.-.-.-] id=24620235 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
uvsE; UV damage endonuclease (EC:3.-.-.-)
UV damage endonuclease UvdE {ECO:0000313|EMBL:ERH02852.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
qs_9_scaffold_2613_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4875..6770)
DNA (1896bp) protein (632aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI00_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45331.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_9_scaffold_2613_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7119..7520)
DNA (402bp) protein (134aa)
Zinc finger SWIM domain-containing protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXD9_9EURY
Zinc finger SWIM domain-containing protein {ECO:0000313|EMBL:EMA38111.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
hypothetical protein
qs_9_scaffold_2613_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7629..8663)
DNA (1035bp) protein (345aa)
DNA repair and recombination protein RadA n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITK3_NATPD
radA; DNA repair and recombination protein RadA
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natr
qs_9_scaffold_2613_11
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8868..9599
DNA (732bp) protein (244aa)
DNA binding protein putative transcriptional regulator n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MPH1_HALMO
DNA binding protein putative transcriptional regulator {ECO:0000313|EMBL:EMA47526.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sourc
acrR; DNA binding protein putative transcriptional regulator
qs_9_scaffold_2613_12
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9802..10827
DNA (1026bp) protein (342aa)
Putative MFS transporter n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D2V6_9EURY
Putative MFS transporter {ECO:0000313|EMBL:ELZ29790.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
putative MFS transporter
qs_9_scaffold_2613_trna_1
unknown

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11331..11447
DNA (117bp)
transferRNA
qs_9_scaffold_2613_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11711..12172)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N0N8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51522.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
qs_9_scaffold_2613_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12295..13377)
DNA (1083bp) protein (361aa)
Xylose dehydrogenase (NAD/NADP) n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N1T7_9EURY
Xylose dehydrogenase (NAD/NADP) {ECO:0000313|EMBL:EMA50660.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
xylose dehydrogenase
qs_9_scaffold_2613_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13541..14710
DNA (1170bp) protein (390aa)
TrmB family transcriptional regulator n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKP4_9EURY
TrmB family transcriptional regulator {ECO:0000313|EMBL:EMA44990.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
transcriptional regulator TrmB
qs_9_scaffold_2613_16
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14735..15010
DNA (276bp) protein (92aa)
Sugar ABC transporter substrate binding protein n=2 Tax=Haloarcula hispanica RepID=G0HRY0_HALHT
sugar ABC transporter substrate-binding protein
Sugar ABC transporter substrate binding protein {ECO:0000313|EMBL:AEM57163.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Halo
Displaying 17 items

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