ggKbase home page

qs_9_scaffold_693

Search features with annotation key words

Displaying items 1-30 of 103 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_693_1
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..453)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NTE5_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ65890.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
qs_9_scaffold_693_2
unknown

Not on your lists

496..729
DNA (234bp) protein (78aa)

This feature has no annotations

qs_9_scaffold_693_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

771..1118
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRW8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92737.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
qs_9_scaffold_693_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1243..2703)
DNA (1461bp) protein (487aa)
Protein translocase subunit SecY n=2 Tax=Halococcus RepID=M0LTN2_9EURY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Protein transport protein SEC61 subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=113250
secY; preprotein translocase subunit SecY
qs_9_scaffold_693_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2716..3297)
DNA (582bp) protein (194aa)
50S ribosomal protein L15P n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5F4_9EURY
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DS
ribosomal protein L15
qs_9_scaffold_693_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3448..3912)
DNA (465bp) protein (155aa)
50S ribosomal protein L30P n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5K3_9EURY
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
50S ribosomal protein L30
qs_9_scaffold_693_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(3912..4604)
DNA (693bp) protein (231aa)
30S ribosomal protein S5P n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQC1_9EURY
30S ribosomal protein S5P {ECO:0000313|EMBL:EMA35767.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 1
30S ribosomal protein S5
qs_9_scaffold_693_8
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(4601..5185)
DNA (585bp) protein (195aa)
50S ribosomal protein L18P n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C1J1_9EURY
50S ribosomal protein L18P/L5E
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium
qs_9_scaffold_693_9
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5185..5712)
DNA (528bp) protein (176aa)
50S ribosomal protein L19e n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IEW5_9EURY
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475, ECO:0000313|EMBL:ELZ93984.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" sourc
50S ribosomal protein L19e
qs_9_scaffold_693_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5718..6806)
DNA (1089bp) protein (363aa)
50S ribosomal protein L32e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUR2_9EURY
50S ribosomal protein L32e {ECO:0000313|EMBL:EMA49371.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae D
50S ribosomal protein L32e
qs_9_scaffold_693_11
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(6796..7410)
DNA (615bp) protein (205aa)
50S ribosomal protein L6 n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9K1_HALJB
rpl6p; 50S ribosomal protein L6P
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus je
qs_9_scaffold_693_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(7438..7830)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS8_NATPD
rps8p; 30S ribosomal protein S8P
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
qs_9_scaffold_693_13
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(7849..8034)
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VY41_9EURY
rps14P; 30S ribosomal protein S14P
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp.
qs_9_scaffold_693_14
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(8034..8612)
DNA (579bp) protein (193aa)
50S ribosomal protein L5 n=1 Tax=Halogranum salarium B-1 RepID=J3A057_9EURY
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000313|EMBL:EJN58673.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranu
rpl5; 50S ribosomal protein L5
qs_9_scaffold_693_15
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8609..9436)
DNA (828bp) protein (276aa)
30S ribosomal protein S4e n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5E4_9EURY
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailanden
30S ribosomal protein S4E
qs_9_scaffold_693_16
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(9433..9828)
DNA (396bp) protein (132aa)
50S ribosomal protein L24P n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LI22_HALJP
50S ribosomal protein L24
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica
qs_9_scaffold_693_17
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(9828..10226)
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y033_NATM8
rpl14; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
qs_9_scaffold_693_18
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(10223..10714)
DNA (492bp) protein (164aa)
30S ribosomal protein S17P n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7N4_9EURY
30S ribosomal protein S17P {ECO:0000313|EMBL:EMA53134.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis
30S ribosomal protein S17
qs_9_scaffold_693_19

Not on your lists


comp(10705..11253)
DNA (549bp) protein (183aa)
50S ribosomal protein L29P n=1 Tax=halophilic archaeon DL31 RepID=G2MM81_9ARCH
50S ribosomal protein L29
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
qs_9_scaffold_693_20
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(11253..12317)
DNA (1065bp) protein (355aa)
30S ribosomal protein S3 n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIY5_HALMO
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM
ribosomal protein S3, eukaryotic/archaeal type
qs_9_scaffold_693_21
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(12317..12832)
DNA (516bp) protein (172aa)
50S ribosomal protein L22P n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LQD9_9EURY
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
ribosomal protein L22/L17
qs_9_scaffold_693_22
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(12883..13305)
DNA (423bp) protein (141aa)
30S ribosomal protein S19P n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7M9_9EURY
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailande
ribosomal protein S19/S15
qs_9_scaffold_693_23
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(13305..14066)
DNA (762bp) protein (254aa)
50S ribosomal protein L2 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XP59_NATM8
rpl2; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;
qs_9_scaffold_693_24
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(14068..14319)
DNA (252bp) protein (84aa)
50S ribosomal protein L23P n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BDP1_9EURY
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56
archaeal ribosomal protein L23
qs_9_scaffold_693_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(14310..14615)
DNA (306bp) protein (102aa)
50S ribosomal protein L4 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFI0_9EURY
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
rpl4lp; 50S ribosomal protein L4P
qs_9_scaffold_693_26
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(14694..14990)
DNA (297bp) protein (99aa)
50S ribosomal protein L4 n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XZS6_9EURY
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DS
50S ribosomal protein L4P
qs_9_scaffold_693_27
Haloquadratum sp. J07HQX50, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(14987..15982)
DNA (996bp) protein (332aa)
50S ribosomal protein L3 n=1 Tax=Haloquadratum sp. J07HQX50 RepID=U1NM29_9EURY
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; TaxID=1238426 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;"
50S ribosomal protein L3
qs_9_scaffold_693_28
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16025..16933)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEF9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44116.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
qs_9_scaffold_693_29
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17153..17533
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIN5_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA44315.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
qs_9_scaffold_693_30
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17526..17891
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4H6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52847.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
Displaying items 1-30 of 103 in total

View Taxonomy