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qs_9_scaffold_1716

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_9_scaffold_1716_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..1119)
DNA (1119bp) protein (373aa)
FAD-binding monooxygenase protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DAU2_9EURY
FAD-binding monooxygenase protein {ECO:0000313|EMBL:ELZ31304.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
hypothetical protein
qs_9_scaffold_1716_2
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1223..1543)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JGJ5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA07478.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 3596
qs_9_scaffold_1716_3
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1740..3056
DNA (1317bp) protein (439aa)
MCP domain-containing signal transducer n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K043_9EURY
MCP domain-containing signal transducer {ECO:0000313|EMBL:EMA14807.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula s
hypothetical protein
qs_9_scaffold_1716_4
unknown

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comp(2978..3223)
DNA (246bp) protein (82aa)

This feature has no annotations

qs_9_scaffold_1716_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3691..4545
DNA (855bp) protein (285aa)
IclR family transcriptional regulator n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXS6_9EURY
IclR family transcriptional regulator {ECO:0000313|EMBL:ELZ28016.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometri
hypothetical protein
qs_9_scaffold_1716_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4671..6215
DNA (1545bp) protein (515aa)
AMP-dependent synthetase and ligase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZJ0_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ELZ28018.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricu
hypothetical protein
qs_9_scaffold_1716_7
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6256..6648)
DNA (393bp) protein (131aa)
Sodium symporter transmembrane region n=2 Tax=Haloarcula RepID=Q5UZ86_HALMA
sodium symporter transmembrane protein
Sodium symporter transmembrane protein {ECO:0000313|EMBL:EMA14806.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula si
qs_9_scaffold_1716_8
Haloarcula sp. D1, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7556..8299)
DNA (744bp) protein (248aa)
Amino acid ABC transporter ATP-binding protein (Fragment) n=1 Tax=Haloarcula sp. D1 RepID=Q330N7_9EURY
Amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:AAQ79810.1}; Flags: Fragment;; TaxID=242927 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcul
amino acid ABC transporter ATP-binding protein
qs_9_scaffold_1716_9
Haloarcula sp. D1, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8404..9798
DNA (1395bp) protein (465aa)
Acetyl-CoA synthetase (ADP-forming) alpha subunit n=1 Tax=Haloarcula sp. D1 RepID=Q330N6_9EURY
Acetyl-CoA synthetase (ADP-forming) alpha subunit {ECO:0000313|EMBL:AAQ79811.1}; TaxID=242927 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Ha
hypothetical protein
qs_9_scaffold_1716_10
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10455..10856
DNA (402bp) protein (134aa)
Putative 4-hydroxybenzoyl CoA thioesterase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D725_9EURY
Putative 4-hydroxybenzoyl CoA thioesterase {ECO:0000313|EMBL:ELZ31301.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeo
hypothetical protein
qs_9_scaffold_1716_11
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10969..11142
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SQR9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG01602.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
qs_9_scaffold_1716_12
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11980..12246
DNA (267bp) protein (89aa)
Gentisate 1,2-dioxygenase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D044_9EURY
Gentisate 1,2-dioxygenase {ECO:0000313|EMBL:ELZ28022.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
phdI; gentisate 1,2-dioxygenase
qs_9_scaffold_1716_13
Haloarcula sp. D1, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12451..13713
DNA (1263bp) protein (421aa)
Leu/Ile/Val-binding protein (Fragment) n=1 Tax=Haloarcula sp. D1 RepID=Q330N2_9EURY
Leu/Ile/Val-binding protein {ECO:0000313|EMBL:AAQ79815.1}; Flags: Fragment;; TaxID=242927 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloar
ABC transporter substrate-binding protein
qs_9_scaffold_1716_14
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13724..14590
DNA (867bp) protein (289aa)
Inner-membrane translocator n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LK71_SYNFM
inner-membrane translocator
Inner-membrane translocator {ECO:0000313|EMBL:ABK17823.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Sy
qs_9_scaffold_1716_15
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14587..15756
DNA (1170bp) protein (390aa)
Inner-membrane translocator n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C902_SPHTD
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RBG_13_Deltaproteobacteria_47_9_curated
inner-membrane translocator
qs_9_scaffold_1716_16
Geobacillus sp. JF8, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15814..16518)
DNA (705bp) protein (235aa)
Amino acid ABC transporter ATPase n=1 Tax=Geobacillus sp. JF8 RepID=S6A3R8_9BACI
amino acid ABC transporter ATPase
Amino acid ABC transporter ATPase {ECO:0000313|EMBL:AGT33316.1}; TaxID=1345697 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus sp. JF8.;"
qs_9_scaffold_1716_17
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16660..17538)
DNA (879bp) protein (293aa)
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D9A6_9EURY
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase {ECO:0000313|EMBL:ELZ31302.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halo
hypothetical protein
qs_9_scaffold_1716_18
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18021..19214
DNA (1194bp) protein (398aa)
ABC-type transport system, substrate-binding protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EI58_9EURY
ABC-type transport system, substrate-binding protein {ECO:0000313|EMBL:ELZ46763.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Ha
yufN; ABC transporter
qs_9_scaffold_1716_19
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19237..20865
DNA (1629bp) protein (543aa)
ABC-type ribose transport system, ATP-binding protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EK08_9EURY
ABC-type ribose transport system, ATP-binding protein {ECO:0000313|EMBL:ELZ46764.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="H
heme ABC transporter ATP-binding protein
qs_9_scaffold_1716_20
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20862..22250
DNA (1389bp) protein (463aa)
Ribose/branched-chain amino acids ABC transporter permease n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EG74_9EURY
Ribose/branched-chain amino acids ABC transporter permease {ECO:0000313|EMBL:ELZ46765.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sour
ABC-type transport system permease protein (probable substrate sugar)
qs_9_scaffold_1716_21
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22247..23488
DNA (1242bp) protein (414aa)
Inner-membrane translocator n=1 Tax=Halobacterium sp. DL1 RepID=G4IF14_9EURY
Ribose ABC transporter permease {ECO:0000313|EMBL:AHG03645.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp.
ABC transporter
qs_9_scaffold_1716_22
unknown

Not on your lists

comp(24407..24586)
DNA (180bp) protein (60aa)

This feature has no annotations

qs_9_scaffold_1716_23
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25264..25587
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D337_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29268.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
Displaying 23 items

View Taxonomy