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sw_10_scaffold_1349

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1349_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..601
DNA (600bp) protein (200aa)
ATPase AAA n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N6V4_9EURY
ATPase AAA {ECO:0000313|EMBL:EMA53581.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
ATPase AAA
sw_10_scaffold_1349_2

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662..1360
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XTU4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS03561.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
sw_10_scaffold_1349_3
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1599..2024)
DNA (426bp) protein (142aa)
Putative signal transduction protein with CBS domains n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NPS5_HALUD
signal transduction protein with CBS domains
Putative signal transduction protein with CBS domains {ECO:0000313|EMBL:ACV10372.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" sourc
sw_10_scaffold_1349_4
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2090..3073)
DNA (984bp) protein (328aa)
hypothetical protein id=24644853 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH09066.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_10_scaffold_1349_5
unknown

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3207..3365
DNA (159bp) protein (53aa)

This feature has no annotations

sw_10_scaffold_1349_6
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3567..4508
DNA (942bp) protein (314aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LMP5_HALJP
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=1227453 species="Arc
translation initiation factor 2 subunit gamma
sw_10_scaffold_1349_7
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4505..4897
DNA (393bp) protein (131aa)
SSU processome protein Utp24 n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LMU3_HALJP
nucleotide binding protein PINc
SSU processome protein Utp24 {ECO:0000313|EMBL:AEM55740.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (s
sw_10_scaffold_1349_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4890..5465
DNA (576bp) protein (192aa)
DNA-directed RNA polymerase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZV1_HALMD
DNA-directed RNA polymerase subunit E'
DNA-directed RNA polymerase {ECO:0000313|EMBL:ACV46859.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohat
sw_10_scaffold_1349_9
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5465..5662
DNA (198bp) protein (66aa)
Transcription elongation factor Spt4 n=4 Tax=Haloarcula RepID=Q5UYR9_HALMA
rpoE''; DNA-directed RNA polymerase subunit E''
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
sw_10_scaffold_1349_10
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5664..6215
DNA (552bp) protein (184aa)
UPF0218 protein C435_01840 n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0L0J6_9EURY
UPF0218 protein C435_01840 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula california
rpo operon protein
sw_10_scaffold_1349_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6484..7149
DNA (666bp) protein (222aa)
NADPH-dependent F420 reductase; K06988 id=24644914 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Reduced coenzyme F420:NADP oxidoreductase {ECO:0000313|EMBL:ERH09128.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
npdG2; F420-dependent NADP reductase
sw_10_scaffold_1349_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7251..8099
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFZ3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43599.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_10_scaffold_1349_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9326..10009
DNA (684bp) protein (228aa)
ABC transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGR3_9EURY
ABC transporter {ECO:0000313|EMBL:EMA43600.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350
ABC transporter
sw_10_scaffold_1349_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10006..10539
DNA (534bp) protein (178aa)
Cobalt transport protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0M2_9EURY
Cobalt transport protein {ECO:0000313|EMBL:EMA37925.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 10
cobalt transport protein
sw_10_scaffold_1349_15

Not on your lists

10551..10739
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0ST76_9EURY
ABC-type cobalt transport system, permease component CbiQ related transporter {ECO:0000313|EMBL:ESS02863.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR6
sw_10_scaffold_1349_16
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10716..12284)
DNA (1569bp) protein (523aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WBV9_9EURY
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:ELY46939.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Na
PAS/PAC sensor signal transduction histidine kinase rbh
sw_10_scaffold_1349_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12334..13587)
DNA (1254bp) protein (418aa)
S-adenosyl-L-homocysteine hydrolase {ECO:0000313|EMBL:EMA43602.1}; EC=3.3.1.1 {ECO:0000313|EMBL:EMA43602.1};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
adenosylhomocysteinase (EC:3.3.1.1)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0U349_9EURY
sw_10_scaffold_1349_18
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13682..15193
DNA (1512bp) protein (504aa)
Sulfatase n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LP95_HALLT
sulfatase
Sulfatase {ECO:0000313|EMBL:ACM57183.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain ATCC 49239 /
sw_10_scaffold_1349_19
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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15195..15614
DNA (420bp) protein (140aa)
Putative membrane protein n=1 Tax=Halonotius sp. J07HN6 RepID=U1NUS7_9EURY
Putative membrane protein {ECO:0000313|EMBL:ERH01406.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
GtrA family protein
sw_10_scaffold_1349_20
unknown

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15596..15715
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 20 items

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