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sw_10_scaffold_1158

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_1158_1
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2..595
DNA (594bp) protein (198aa)
Family 2 glycosyl transferase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y3R1_9EURY
glycosyl transferase family 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:AHG00299.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii
sw_10_scaffold_1158_2
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(681..1754)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D6B8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30242.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_10_scaffold_1158_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1980..2291
DNA (312bp) protein (104aa)
Glutaredoxin n=1 Tax=Halogranum salarium B-1 RepID=J3JCS1_9EURY
Glutaredoxin {ECO:0000313|EMBL:EJN56861.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_10_scaffold_1158_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2354..2620)
DNA (267bp) protein (89aa)
KEOPS complex Pcc1-like subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC53_9EURY
KEOPS complex Pcc1-like subunit {ECO:0000313|EMBL:EMA55431.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
rpo operon protein
sw_10_scaffold_1158_5
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2655..2789)
DNA (135bp) protein (45aa)
DNA-directed RNA polymerase subunit p (EC:2.7.7.6)
DNA-directed RNA polymerase subunit P {ECO:0000256|HAMAP-Rule:MF_00615}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00615};; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
DNA-directed RNA polymerase subunit P n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NSL7_HALBP
sw_10_scaffold_1158_6
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2821..3093)
DNA (273bp) protein (91aa)
50S ribosomal protein L37Ae n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NSL6_HALBP
50S ribosomal protein L37ae
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halo
sw_10_scaffold_1158_7
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3214..3939)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V1L9_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV46583.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_10_scaffold_1158_8
unknown

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comp(4030..4524)
DNA (495bp) protein (165aa)

This feature has no annotations

sw_10_scaffold_1158_9
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(4752..6272)
DNA (1521bp) protein (507aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
Probable tRNA pseudouridine synthase D n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XFW3_9EURY
tRNA pseudouridine synthase D
sw_10_scaffold_1158_10
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6463..6801)
DNA (339bp) protein (113aa)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:ESP89680.1}; EC=3.1.1.29 {ECO:0000313|EMBL:ESP89680.1};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candi
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HG37_9EURY
sw_10_scaffold_1158_11
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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6961..7719
DNA (759bp) protein (253aa)
Probable deoxycytidine triphosphate deaminase {ECO:0000256|HAMAP-Rule:MF_00146}; Short=dCTP deaminase {ECO:0000256|HAMAP-Rule:MF_00146};; EC=3.5.4.13 {ECO:0000256|HAMAP-Rule:MF_00146, ECO:0000313|EMBL
Probable deoxycytidine triphosphate deaminase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VKZ5_9EURY
deoxycytidine triphosphate deaminase
sw_10_scaffold_1158_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7716..8666
DNA (951bp) protein (317aa)
Phosphomethylpyrimidine kinase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQH0_9EURY
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EMA46725.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
phosphomethylpyrimidine kinase
sw_10_scaffold_1158_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8706..9410
DNA (705bp) protein (235aa)
Methyltransferase type 11 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSM5_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:EMA36537.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 1
Methyltransferase type 11
sw_10_scaffold_1158_14
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9595..10044
DNA (450bp) protein (150aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3L3_HALJB
Glyoxalase/bleomycin resistance protein/dioxygenase
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ADJ15320.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" sou
sw_10_scaffold_1158_15
unknown

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10156..10353
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying 15 items

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