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sw_10_scaffold_35

Search features with annotation key words

Displaying items 1-30 of 162 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_35_1
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(127..864)
DNA (738bp) protein (246aa)
Uncharacterized protein n=2 Tax=Halobacterium salinarum RepID=B0R687_HALS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAG19967.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
sw_10_scaffold_35_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1060..1671
DNA (612bp) protein (204aa)
Formimidoyltetrahydrofolate cyclodeaminase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MK51_9EURY
Formimidoyltetrahydrofolate cyclodeaminase {ECO:0000313|EMBL:EMA46057.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
formimidoyltetrahydrofolate cyclodeaminase
sw_10_scaffold_35_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1843..2172)
DNA (330bp) protein (110aa)
Major facilitator superfamily protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4Z8_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:EMA52613.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
major facilitator superfamily transporter
sw_10_scaffold_35_4

Not on your lists

comp(2295..2519)
DNA (225bp) protein (75aa)
Major facilitator superfamily MFS_1 n=1 Tax=halophilic archaeon DL31 RepID=G2MGK8_9ARCH
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEN06252.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_10_scaffold_35_5
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2539..2748)
DNA (210bp) protein (70aa)
major facilitator superfamily protein; K08177 MFS transporter, OFA family, oxalate/formate antiporter id=24615326 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Major facilitator superfamily protein {ECO:0000313|EMBL:ESP87218.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Can
major facilitator superfamily MFS_1
sw_10_scaffold_35_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2711..2995)
DNA (285bp) protein (95aa)
Major facilitator superfamily protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4Z8_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:EMA52613.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
tp11; major facilitator family oxalate/formate antiporter
sw_10_scaffold_35_7
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3069..4367)
DNA (1299bp) protein (433aa)
Glutamate dehydrogenase n=1 Tax=Halogranum salarium B-1 RepID=J2Z9R6_9EURY
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
glutamate dehydrogenase 1
sw_10_scaffold_35_8
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4374..4604)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XAX2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY58556.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
hypothetical protein
sw_10_scaffold_35_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4720..5097
DNA (378bp) protein (126aa)
Bacterio-opsin activator-like protein n=2 Tax=Halococcus hamelinensis RepID=M0MBN9_9EURY
Bacterio-opsin activator-like protein {ECO:0000313|EMBL:EMA42034.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus ha
signal-transducing histidine kinase/response regulator
sw_10_scaffold_35_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5072..7576
DNA (2505bp) protein (835aa)
Bacterio-opsin activator-like protein n=2 Tax=Halococcus hamelinensis RepID=M0MBN9_9EURY
Bacterio-opsin activator-like protein {ECO:0000313|EMBL:EMA42034.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus ha
putative PAS/PAC sensor protein
sw_10_scaffold_35_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7666..8736
DNA (1071bp) protein (357aa)
Cationic amino acid transporter n=2 Tax=Halococcus hamelinensis RepID=M0LWT9_9EURY
Cationic amino acid transporter {ECO:0000313|EMBL:EMA37936.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameline
cat3; cationic amino acid transporter
sw_10_scaffold_35_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9099..10190)
DNA (1092bp) protein (364aa)
Flavin-containing amine-oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3L5_9EURY
Flavin-containing amine-oxidoreductase {ECO:0000313|EMBL:EMA52461.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus s
NAD/fad-dependent oxidoreductase
sw_10_scaffold_35_13
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10342..11370)
DNA (1029bp) protein (343aa)
tpa07; transport ATPase 7 ( substrate arsenite) (EC:3.6.3.-)
Arsenical pump-driving ATPase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JFB0_HALVA
Arsenical pump-driving ATPase {ECO:0000313|EMBL:EMA07023.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismorti
sw_10_scaffold_35_14
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11813..12865)
DNA (1053bp) protein (351aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DT63_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK39356.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
hypothetical protein
sw_10_scaffold_35_15
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13070..14170)
DNA (1101bp) protein (367aa)
Aspartate transaminase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MMD9_HALMO
Aspartate transaminase {ECO:0000313|EMBL:EMA45600.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.
class I and II aminotransferase
sw_10_scaffold_35_16
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14365..14877
DNA (513bp) protein (171aa)
CinA domain protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIV4_HALMO
CinA domain protein {ECO:0000313|EMBL:EMA45601.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
CinA domain protein
sw_10_scaffold_35_17
unknown

Not on your lists

comp(14850..14966)
DNA (117bp) protein (39aa)

This feature has no annotations

sw_10_scaffold_35_18
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14988..15947)
DNA (960bp) protein (320aa)
PHP-associated domain containing protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PFI1_9EURY
polymerase/histidinol phosphatase-like protein
PHP-associated domain containing protein {ECO:0000313|EMBL:ERJ06477.1}; Polymerase/histidinol phosphatase-like protein {ECO:0000313|EMBL:CCQ34358.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Hal
sw_10_scaffold_35_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16006..17202)
DNA (1197bp) protein (399aa)
Erythromycin esterase-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N934_9EURY
Erythromycin esterase-like protein {ECO:0000313|EMBL:EMA53160.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salif
eye; succinoglycan biosynthesis
sw_10_scaffold_35_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(17782..18219)
DNA (438bp) protein (146aa)
Transcription elongation factor Spt5 n=2 Tax=Halococcus RepID=M0MJL6_9EURY
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
NusG antitermination factor
sw_10_scaffold_35_21
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18221..18394)
DNA (174bp) protein (58aa)
sec61c; preprotein translocase Sec61 subunit gamma; K07342 protein transport protein SEC61 subunit gamma and related proteins id=24620965 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1238427 species="Archaea; Euryarchaeo
secE; preprotein translocase subunit SecE
sw_10_scaffold_35_22
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18701..19846)
DNA (1146bp) protein (382aa)
Cell division protein FtsZ n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KPE0_9EURY
cell division protein FtsZ
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.
sw_10_scaffold_35_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19939..21321)
DNA (1383bp) protein (461aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1227455 species="Archa
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGR9_9EURY
hypothetical protein
sw_10_scaffold_35_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21469..22860)
DNA (1392bp) protein (464aa)
Sodium/calcium exchanger membrane subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHW2_9EURY
Sodium/calcium exchanger membrane subunit {ECO:0000313|EMBL:EMA44928.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
sodium/calcium exchanger membrane subunit
sw_10_scaffold_35_25
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23129..23971
DNA (843bp) protein (281aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=931277 species="Archaea; Euryar
Shikimate dehydrogenase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIW5_HALMO
shikimate 5-dehydrogenase
sw_10_scaffold_35_26
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23996..24931
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZ92_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA37679.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_10_scaffold_35_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25061..25948
DNA (888bp) protein (296aa)
Branched-chain amino acid aminotransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9F6_9EURY
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EMA53744.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
class IV aminotransferase
sw_10_scaffold_35_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


26264..27334
DNA (1071bp) protein (357aa)
Protein pelota homolog {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00004956}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00011872};; TaxID=1227456 species="Archaea; E
Protein pelota homolog n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3D8_9EURY
translation release factor pelota
sw_10_scaffold_35_29
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

27679..29049
DNA (1371bp) protein (457aa)
ADP-ribosylglycohydrolase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZ91_9BACT
ADP-ribosylglycohydrolase Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
ADP-ribosylglycohydrolase
sw_10_scaffold_35_30

Not on your lists

29266..29961
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XUY9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS02367.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
signal transduction histidine kinase LytS
Displaying items 1-30 of 162 in total

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