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sw_10_scaffold_565

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_10_scaffold_565_1
unknown

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comp(559..822)
DNA (264bp) protein (88aa)

This feature has no annotations

sw_10_scaffold_565_2

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comp(865..3156)
DNA (2292bp) protein (764aa)
4-amino-4-deoxy-L-arabinose transferase related glycosyltransferases of PMT family n=1 Tax=uncultured archaeon A07HR60 RepID=V5ABD3_9ARCH
4-amino-4-deoxy-L-arabinose transferase related glycosyltransferases of PMT family {ECO:0000313|EMBL:ESS13045.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A
hypothetical protein
sw_10_scaffold_565_3
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3153..4442)
DNA (1290bp) protein (430aa)
ABC transporter-related protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BUR2_9EURY
ABC transporter-related protein {ECO:0000313|EMBL:ELZ14128.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermoto
ABC-type spermidine/putrescine transport system, ATPase component
sw_10_scaffold_565_4
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4432..6039)
DNA (1608bp) protein (536aa)
ABC-type iron(III) transport system, permease protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R5J0_HALMT
sfuB; ABC-type iron(III) transport system, permease protein
ABC-type iron(III) transport system, permease protein {ECO:0000313|EMBL:AFK19500.1}; Iron ABC transporter permease {ECO:0000313|EMBL:AHZ21158.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobact
sw_10_scaffold_565_5
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6041..6886)
DNA (846bp) protein (282aa)
Putative iron-III ABC transporter periplasmic substrate-binding protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GE49_9EURY
Putative iron-III ABC transporter periplasmic substrate-binding protein {ECO:0000313|EMBL:ELZ70536.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halof
sfuA; ABC-type iron(III) transport system,substrate-binding protein
sw_10_scaffold_565_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7213..8379)
DNA (1167bp) protein (389aa)
Alpha-1,4-glucan-protein synthase, UDP-forming n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYP2_9EURY
Alpha-1,4-glucan-protein synthase, UDP-forming {ECO:0000313|EMBL:EMA50433.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
Reversibly glycosylated polypeptide
sw_10_scaffold_565_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8549..10060)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N022_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50434.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_10_scaffold_565_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10079..12559)
DNA (2481bp) protein (827aa)
Putative cell surface protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6T6_9EURY
Putative cell surface protein {ECO:0000313|EMBL:EMA41108.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinens
FG-GAP repeat-containing protein, possibly sugar-related
sw_10_scaffold_565_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12561..13448)
DNA (888bp) protein (296aa)
SOUL heme-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXW3_9EURY
SOUL heme-binding protein {ECO:0000313|EMBL:EMA50436.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
SOUL heme-binding protein
sw_10_scaffold_565_10
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(13590..14588)
DNA (999bp) protein (333aa)
mRNA 3'-end processing factor n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WWR2_9EURY
mRNA 3'-end processing factor {ECO:0000313|EMBL:ELY53919.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolytic
hypothetical protein
sw_10_scaffold_565_11
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(14638..16287)
DNA (1650bp) protein (550aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0
DNA ligase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WXK5_9EURY
ATP-dependent DNA ligase
sw_10_scaffold_565_12
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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16509..17006
DNA (498bp) protein (166aa)
Zinc finger SWIM domain-containing protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NCR9_9EURY
Zinc finger SWIM domain-containing protein {ECO:0000313|EMBL:EMA54465.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
hypothetical protein
sw_10_scaffold_565_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17134..17877
DNA (744bp) protein (248aa)
dehydrogenase/reductase 2 (EC:1.1.1.-)
3-oxoacyl-ACP reductase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUA6_9EURY
3-oxoacyl-ACP reductase {ECO:0000313|EMBL:EMA36753.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_10_scaffold_565_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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17879..19480
DNA (1602bp) protein (534aa)
Acetyl-CoA carboxylase alpha subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKW0_9EURY
Acetyl-CoA carboxylase alpha subunit {ECO:0000313|EMBL:EMA45379.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
methylmalonyl-CoA carboxyltransferase
sw_10_scaffold_565_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19526..20683
DNA (1158bp) protein (386aa)
Acetyl-CoA acetyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLQ4_9EURY
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EMA45380.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
acetyl-CoA acetyltransferase
sw_10_scaffold_565_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20680..21102
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N027_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50439.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_10_scaffold_565_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21163..21876)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N185_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50440.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_10_scaffold_565_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22000..22161
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXW9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50441.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_10_scaffold_565_19
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22206..23243
DNA (1038bp) protein (346aa)
Sodium/calcium exchanger membrane region n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DDU5_HALXS
sodium/calcium exchanger membrane region
Sodium/calcium exchanger membrane region {ECO:0000313|EMBL:AEH39199.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduen
sw_10_scaffold_565_20
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23388..23933)
DNA (546bp) protein (182aa)
Asn family transcriptional regulator n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IN17_9EURY
Asn family transcriptional regulator {ECO:0000313|EMBL:ELZ98110.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum AT
trh3; Asn family transcriptional regulator
sw_10_scaffold_565_21
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24129..24551
DNA (423bp) protein (141aa)
TrkA-N domain-containing protein n=3 Tax=Haloferax RepID=L5NXS3_9EURY
TrkA-N domain-containing protein {ECO:0000313|EMBL:ELZ92215.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus
trkA8; TrkA-N domain protein
sw_10_scaffold_565_22
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24548..26731
DNA (2184bp) protein (728aa)
Transporter n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IMT3_9EURY
Transporter {ECO:0000313|EMBL:ELZ98111.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;"
cat4; transport protein (probable substrate cationic amino acids)
sw_10_scaffold_565_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(26892..26987)
DNA (96bp) protein (32aa)
Ferritin n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MKW4_9EURY
Ferritin {ECO:0000313|EMBL:EMA50442.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
Displaying 23 items

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