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sw_11_scaffold_439

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_439_1

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comp(2..634)
DNA (633bp) protein (211aa)
Sodium/proton antiporter, CPA1 family n=1 Tax=uncultured archaeon A07HR67 RepID=V4XB97_9ARCH
Sodium/proton antiporter, CPA1 family {ECO:0000313|EMBL:ESS05134.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
kefC; potassium transport protein kefC
sw_11_scaffold_439_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(701..1603)
DNA (903bp) protein (301aa)
hydrolase ( hydroxyacylglutathione hydrolase ) 4 (EC:3.1.2.6)
Probable metallo-beta-lactamase family hydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISF2_NATPD
Beta-lactamase domain protein {ECO:0000313|EMBL:CAI48935.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
sw_11_scaffold_439_3
unknown

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1691..1837
DNA (147bp) protein (49aa)

This feature has no annotations

sw_11_scaffold_439_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2241..2483)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISF1_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48936.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_439_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3188..4561
DNA (1374bp) protein (458aa)
serS; seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISF0_NATPD
sw_11_scaffold_439_6
unknown

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comp(4878..5123)
DNA (246bp) protein (82aa)

This feature has no annotations

sw_11_scaffold_439_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5179..5523)
DNA (345bp) protein (115aa)
DUF1486 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQD7_NATM8
DUF1486 family protein
DUF1486 family protein {ECO:0000313|EMBL:CCQ36295.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (s
sw_11_scaffold_439_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5611..6108
DNA (498bp) protein (166aa)
Probable ribosome biogenesis protein NP_1700A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISE6_NATPD
hypothetical protein
Probable ribosome biogenesis protein NP_1700A {ECO:0000256|HAMAP-Rule:MF_01116}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="
sw_11_scaffold_439_9
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6147..7211)
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VV38_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY41039.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
sw_11_scaffold_439_10
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7258..7407
DNA (150bp) protein (50aa)
50S ribosomal protein L40e n=2 Tax=Natronomonas RepID=RL40_NATPD
rpl40e; 50S ribosomal protein L40e
50S ribosomal protein L40e {ECO:0000256|HAMAP-Rule:MF_00788}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
sw_11_scaffold_439_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7466..8077)
DNA (612bp) protein (204aa)
hydrolase ( hydroxyacylglutathione hydrolase ) 8 (EC:3.1.2.6)
Probable metallo-beta-lactamase family hydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUP3_NATPD
Beta-lactamase domain protein {ECO:0000313|EMBL:CAI48137.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
sw_11_scaffold_439_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8103..8267)
DNA (165bp) protein (55aa)
Sensor box histidine kinase {ECO:0000313|EMBL:CAI48136.2}; EC=2.7.13.3 {ECO:0000313|EMBL:CAI48136.2};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Sensor box histidine kinase n=2 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUP4_NATPD
signal-transducing histidine kinase
sw_11_scaffold_439_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8375..8584)
DNA (210bp) protein (70aa)
Sensor box histidine kinase {ECO:0000313|EMBL:CAI48136.2}; EC=2.7.13.3 {ECO:0000313|EMBL:CAI48136.2};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
sw_11_scaffold_439_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9039..9212
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUP5_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48135.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_11_scaffold_439_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9209..9778
DNA (570bp) protein (190aa)
UPF0215 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUP6_NATPD
hypothetical protein
UPF0215 protein NP_0086A {ECO:0000256|HAMAP-Rule:MF_00582}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
sw_11_scaffold_439_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9804..10388
DNA (585bp) protein (195aa)
Uracil-DNA glycosylase {ECO:0000313|EMBL:CAI48133.1}; EC=3.2.2.27 {ECO:0000313|EMBL:CAI48133.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natrono
Uracil-DNA glycosylase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUP7_NATPD
uracil-DNA glycosylase-like protein
sw_11_scaffold_439_17

Not on your lists

10704..11747
DNA (1044bp) protein (348aa)
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XVQ8_9ARCH
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:ESS04276.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67
phosphonate ABC transporter periplasmic phosphonate-binding protein
sw_11_scaffold_439_18
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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11821..12627
DNA (807bp) protein (269aa)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacal
phosphonate ABC transporter ATPase (EC:3.6.3.28)
ABC transporter n=1 Tax=Halorubrum sp. T3 RepID=UPI0003665F6D
sw_11_scaffold_439_19
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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12624..13628
DNA (1005bp) protein (335aa)
phosphate ABC transporter permease n=1 Tax=Halorubrum sp. T3 RepID=UPI0003613685
Phosphonate ABC transporter inner membrane subunit {ECO:0000313|EMBL:EMA61347.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halo
phosphonate ABC transporter inner membrane subunit
sw_11_scaffold_439_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13756..14400
DNA (645bp) protein (215aa)
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000255|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000255|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000255|HAMAP-
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=HIS5_NATPD
sw_11_scaffold_439_21
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(15028..15480)
DNA (453bp) protein (151aa)
Lrp/AsnC family transcription regulator n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y5T3_NATM8
Lrp/AsnC family transcription regulator
Lrp/AsnC family transcription regulator {ECO:0000313|EMBL:CCQ37930.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
sw_11_scaffold_439_22
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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15608..16981
DNA (1374bp) protein (458aa)
L-glutamine synthetase (EC:6.3.1.2) id=24649517 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic ar
glutamine synthetase, type I
sw_11_scaffold_439_23
unknown

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comp(17140..17328)
DNA (189bp) protein (63aa)

This feature has no annotations

sw_11_scaffold_439_24
unknown

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comp(17409..17555)
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying 24 items

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