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sw_11_scaffold_1799

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_11_scaffold_1799_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..294)
DNA (294bp) protein (98aa)
arabinose efflux permease family protein id=24645986 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Arabinose efflux permease {ECO:0000313|EMBL:ERH10201.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
arabinose efflux permease family protein
sw_11_scaffold_1799_2

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367..1059
DNA (693bp) protein (231aa)
Uncharacterized protein id=24645405 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ESS11958.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sw_11_scaffold_1799_3

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1487..1912
DNA (426bp) protein (142aa)
Universal stress protein UspA related nucleotide-binding protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4YKE9_9ARCH
Universal stress protein UspA related nucleotide-binding protein {ECO:0000313|EMBL:ESS11957.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
universal stress protein
sw_11_scaffold_1799_4
unknown

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comp(2102..2431)
DNA (330bp) protein (110aa)

This feature has no annotations

sw_11_scaffold_1799_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2722..3450
DNA (729bp) protein (243aa)
Competence-damage protein CinA-like protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LQ60_HALJP
Competence-damage protein CinA-like protein {ECO:0000313|EMBL:EMA34180.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarc
dip3; competence-damage protein CinA-like protein
sw_11_scaffold_1799_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3559..3972
DNA (414bp) protein (138aa)
hypothetical protein; K08978 putative membrane protein id=24647495 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Putative membrane protein {ECO:0000313|EMBL:ERH08632.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_11_scaffold_1799_7
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4171..4398
DNA (228bp) protein (76aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025, ECO:0000313|EMBL:ELY84694.1}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025, ECO:0000313|EMBL:ELY84694.1};; TaxID=1227494 species=
DNA-directed RNA polymerase subunit H n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CVA7_9EURY
RNA polymerase Rpb5
sw_11_scaffold_1799_8
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4395..5903
DNA (1509bp) protein (503aa)
DNA-directed RNA polymerase subunit B'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PP14_9EURY
RNA polymerase beta subunit {ECO:0000313|EMBL:ACV10969.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (
sw_11_scaffold_1799_9
unknown

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comp(5822..6340)
DNA (519bp) protein (173aa)

This feature has no annotations

sw_11_scaffold_1799_10
unknown

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comp(6386..7351)
DNA (966bp) protein (322aa)

This feature has no annotations

sw_11_scaffold_1799_11
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7456..7725
DNA (270bp) protein (90aa)
rpoB; DNA-directed RNA polymerase subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=24649257 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="haloph
rpoB1; DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
sw_11_scaffold_1799_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7728..10226
DNA (2499bp) protein (833aa)
rpoA'; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=24649256 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="haloph
DNA-directed RNA polymerase subunit A'
Displaying 12 items

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