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sw_12_scaffold_361

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_361_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..180
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXB7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49963.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_361_2
unknown

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617..832
DNA (216bp) protein (72aa)

This feature has no annotations

sw_12_scaffold_361_3
unknown

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976..1083
DNA (108bp) protein (36aa)

This feature has no annotations

sw_12_scaffold_361_4
unknown

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1099..1329
DNA (231bp) protein (77aa)

This feature has no annotations

sw_12_scaffold_361_5
unknown

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comp(1326..1634)
DNA (309bp) protein (103aa)

This feature has no annotations

sw_12_scaffold_361_6
unknown

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1739..1954
DNA (216bp) protein (72aa)

This feature has no annotations

sw_12_scaffold_361_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2065..2439
DNA (375bp) protein (125aa)
Translation initiation factor 5A n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQ55_NATM8
tif5A; translation initiation factor aIF-5A
Translation initiation factor 5A {ECO:0000256|HAMAP-Rule:MF_00085, ECO:0000256|SAAS:SAAS00016433}; Hypusine-containing protein {ECO:0000256|HAMAP-Rule:MF_00085}; eIF-5A {ECO:0000256|HAMAP-Rule:MF_0008
sw_12_scaffold_361_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2519..3337
DNA (819bp) protein (273aa)
Agmatinase {ECO:0000313|EMBL:CCI69574.1}; EC=3.5.3.11 {ECO:0000313|EMBL:CCI69574.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" sou
speB2; agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=I7IRC4_NATPD
sw_12_scaffold_361_9
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3441..3824
DNA (384bp) protein (128aa)
Probable glycine cleavage system H protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X0R9_9EURY
Probable glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natrono
glycine cleavage system H protein
sw_12_scaffold_361_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3928..4881
DNA (954bp) protein (318aa)
crtB; geranylgeranyl-diphosphate geranylgeranyltransferase (phytoene synthase) (EC:2.5.1.32)
Phytoene synthase {ECO:0000313|EMBL:CAI50476.1}; EC=2.5.1.32 {ECO:0000313|EMBL:CAI50476.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
Phytoene synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN30_NATPD
sw_12_scaffold_361_11
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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4865..6319
DNA (1455bp) protein (485aa)
Carotenoid oxygenase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MPB8_9EURY
Carotenoid oxygenase {ECO:0000313|EMBL:EMA46564.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM 108
Carotenoid oxygenase
sw_12_scaffold_361_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7027..7167)
DNA (141bp) protein (47aa)
Probable carotenoid biosynthesis protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN31_NATPD
carotenoid biosynthesis protein
Probable carotenoid biosynthesis protein {ECO:0000313|EMBL:CAI50475.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomo
sw_12_scaffold_361_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7300..7920)
DNA (621bp) protein (207aa)
Blue (Type 1) copper domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2W2_HALMD
blue (type 1) copper domain-containing protein
Blue (Type 1) copper domain protein {ECO:0000313|EMBL:ACV47434.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
sw_12_scaffold_361_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8061..8885)
DNA (825bp) protein (275aa)
Probable carotenoid biosynthesis protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN31_NATPD
carotenoid biosynthesis protein
Probable carotenoid biosynthesis protein {ECO:0000313|EMBL:CAI50475.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomo
sw_12_scaffold_361_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8878..9750)
DNA (873bp) protein (291aa)
lye; lycopene elongase (EC:2.5.1.-)
Lycopene elongase {ECO:0000313|EMBL:CCQ37170.1}; EC=2.5.1.- {ECO:0000313|EMBL:CCQ37170.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.
Lycopene elongase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XS73_NATM8
sw_12_scaffold_361_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9783..11264)
DNA (1482bp) protein (494aa)
crtI_1; phytoene dehydrogenase 1 (phytoene desaturase) (EC:1.14.99.-)
Phytoene dehydrogenase (Phytoene desaturase) {ECO:0000313|EMBL:CAI50473.1}; EC=1.14.99.- {ECO:0000313|EMBL:CAI50473.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
Phytoene dehydrogenase (Phytoene desaturase) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN33_NATPD
sw_12_scaffold_361_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12125..12892)
DNA (768bp) protein (256aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=348780 species="Archaea;
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN37_NATPD
hypothetical protein
sw_12_scaffold_361_18
unknown

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comp(12945..13385)
DNA (441bp) protein (147aa)

This feature has no annotations

sw_12_scaffold_361_19
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13393..13713
DNA (321bp) protein (107aa)
Zinc transporter n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1Z2_9EURY
Zinc transporter {ECO:0000313|EMBL:EMA51967.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552
zip; zinc transporter
sw_12_scaffold_361_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13891..14628)
DNA (738bp) protein (246aa)
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10)
Probable aminomethyltransferase {ECO:0000255|HAMAP-Rule:MF_00259}; EC=2.1.2.10 {ECO:0000255|HAMAP-Rule:MF_00259};; Glycine cleavage system T protein {ECO:0000255|HAMAP-Rule:MF_00259}; TaxID=348780 spe
Probable aminomethyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=GCST_NATPD
Displaying 20 items

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