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sw_12_scaffold_293

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_293_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2..808)
DNA (807bp) protein (269aa)
Putative protease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZH6_9EURY
Putative protease {ECO:0000313|EMBL:EMA49830.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;
abortive infection protein
sw_12_scaffold_293_2
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(811..2880)
DNA (2070bp) protein (690aa)
ATP-dependent protease Lon (EC:3.4.21.53)
ATP-dependent protease Lon n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0N3H5_HALMO
ATP-dependent protease Lon {ECO:0000313|EMBL:EMA54140.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis
sw_12_scaffold_293_3
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3077..3679
DNA (603bp) protein (201aa)
Nicotinamide-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00243}; EC=2.7.7.1 {ECO:0000256|HAMAP-Rule:MF_00243};; NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00243}; NAD(+) pyrophosp
nadM; nicotinamide-nucleotide adenylyltransferase (EC:2.7.7.1)
Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KEE8_HALAR
sw_12_scaffold_293_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3731..4462
DNA (732bp) protein (244aa)
NAD operon protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFT8_9EURY
NAD operon protein {ECO:0000313|EMBL:EMA43295.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5
hypothetical protein
sw_12_scaffold_293_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4546..5403
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWU2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA38027.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_12_scaffold_293_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5455..5907
DNA (453bp) protein (151aa)
FMN-binding domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITX2_NATPD
hypothetical protein
FMN-binding domain protein {ECO:0000313|EMBL:CAI48411.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis
sw_12_scaffold_293_7
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6049..7635)
DNA (1587bp) protein (529aa)
Thermosome subunit 3 n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0N4P7_HALMO
Thermosome subunit 3 {ECO:0000313|EMBL:EMA51665.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
ths3; thermosome subunit 3
sw_12_scaffold_293_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7809..8072
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX24_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50131.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_293_9
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8069..8878
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRT9_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV13044.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_12_scaffold_293_10
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8961..9536)
DNA (576bp) protein (192aa)
Zn-dependent hydrolase, glyoxylase n=1 Tax=Natronococcus occultus SP4 RepID=L0JZP4_9EURY
Zn-dependent hydrolase, glyoxylase
Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:AGB37574.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occult
sw_12_scaffold_293_11
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9673..10386
DNA (714bp) protein (238aa)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408}
thyX; thymidylate synthase (EC:2.1.1.-)
Thymidylate synthase ThyX n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JRU9_HALVA
sw_12_scaffold_293_12
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10509..11342
DNA (834bp) protein (278aa)
IclR-like transcriptional regulator n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I9S3_HALRX
IclR-like transcriptional regulator
IclR-like transcriptional regulator {ECO:0000313|EMBL:AGB16325.1}; Flags: Precursor;; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halo
sw_12_scaffold_293_13
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11335..11625
DNA (291bp) protein (97aa)
Membrane protein n=3 Tax=Halobiforma lacisalsi RepID=M0L6A1_9EURY
hypothetical protein
Membrane protein {ECO:0000313|EMBL:EMA27969.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
sw_12_scaffold_293_trna_1
unknown

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11739..11813
DNA (75bp)
transferRNA
sw_12_scaffold_293_14
Chroococcidiopsis thermalis, Chroococcidiopsis, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

11998..13485
DNA (1488bp) protein (496aa)
Ig domain protein group 1 domain protein n=1 Tax=Chroococcidiopsis thermalis PCC 7203 RepID=K9TU55_9CYAN
Ig domain-containing protein group 1 domain-containing protein
Ig domain protein group 1 domain protein {ECO:0000313|EMBL:AFY86352.1}; TaxID=251229 species="Bacteria; Cyanobacteria; Pleurocapsales; Chroococcidiopsis.;" source="Chroococcidiopsis thermalis PCC 7203
sw_12_scaffold_293_15
unknown

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13900..15117
DNA (1218bp) protein (406aa)

This feature has no annotations

sw_12_scaffold_293_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15266..15973
DNA (708bp) protein (236aa)
Halocyanin-like protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5X4_9EURY
Halocyanin-like protein {ECO:0000313|EMBL:EMA39999.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hcp4; halocyanin precursor-like
sw_12_scaffold_293_17
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16087..17190)
DNA (1104bp) protein (368aa)
cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MLI2_HALMO
Cysteine desulfurase {ECO:0000313|EMBL:EMA45584.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.;"
sw_12_scaffold_293_18
unknown

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comp(17276..17467)
DNA (192bp) protein (64aa)

This feature has no annotations

sw_12_scaffold_293_19
Equid herpesvirus 1, Varicellovirus, Herpesvirales, Viruses

Not on your lists

comp(17717..18655)
DNA (939bp) protein (313aa)
Glycoprotein gp2 n=1 Tax=Equid herpesvirus 1 RepID=Q8V0L5_9ALPH
Envelope glycoprotein {ECO:0000313|EMBL:AII81165.1}; TaxID=10326 species="Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; Alphaherpesvirinae; Varicellovirus.;" source="Equid herpes
Mucin-19
sw_12_scaffold_293_20
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18696..19877)
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHW3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45322.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_293_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20034..20801
DNA (768bp) protein (256aa)
3'-5' exonuclease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHU7_9EURY
3'-5' exonuclease {ECO:0000313|EMBL:EMA45276.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 53
hypothetical protein
sw_12_scaffold_293_22
unknown

Not on your lists

21323..21766
DNA (444bp) protein (148aa)

This feature has no annotations

sw_12_scaffold_293_23
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21780..22445
DNA (666bp) protein (222aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QW86_9EURY
Bacterio-opsin activator HTH domain protein {ECO:0000313|EMBL:EFW91220.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Halada
putative DNA binding protein
sw_12_scaffold_293_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22591..23235)
DNA (645bp) protein (215aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJZ6_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA44780.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
DNA binding protein
sw_12_scaffold_293_25
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23537..24322
DNA (786bp) protein (262aa)
Bacteriorhodopsin n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IDG5_9EURY
Bacteriorhodopsin {ECO:0000313|EMBL:ELZ94097.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;"
bacteriorhodopsin
sw_12_scaffold_293_26
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24401..25279
DNA (879bp) protein (293aa)
Amidohydrolase 2 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QVZ9_9EURY
Amidohydrolase 2 {ECO:0000313|EMBL:EFW91412.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX25
amidohydrolase 2
sw_12_scaffold_293_27
unknown

Not on your lists

25474..25785
DNA (312bp) protein (104aa)

This feature has no annotations

sw_12_scaffold_293_28
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25844..26962)
DNA (1119bp) protein (373aa)
ORC1-type DNA replication protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NQX8_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocuri
cdc6; cell division control protein 6
sw_12_scaffold_293_29
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27065..27472)
DNA (408bp) protein (136aa)
DNA-binding protein MutS2 n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LMA0_9EURY
DNA-binding protein MutS2 {ECO:0000256|HAMAP-Rule:MF_00971}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;
DNA mismatch repair protein MutS
Displaying 30 items

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