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sw_12_scaffold_312

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_12_scaffold_312_1
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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248..703
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XT53_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY63823.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
hypothetical protein
sw_12_scaffold_312_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1103..1840)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MF20_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43284.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
PAC2 family protein
sw_12_scaffold_312_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2511..3419
DNA (909bp) protein (303aa)
RNA methylase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW28_9EURY
RNA methylase {ECO:0000313|EMBL:EMA49816.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
NOL1/NOP2/sun family putative RNA methylase
sw_12_scaffold_312_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3416..3967
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZG4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49815.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_12_scaffold_312_5
unknown

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4426..4569
DNA (144bp) protein (48aa)

This feature has no annotations

sw_12_scaffold_312_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4604..6169)
DNA (1566bp) protein (522aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M6Z4_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA43279.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_12_scaffold_312_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6282..7700
DNA (1419bp) protein (473aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CUY9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27020.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_12_scaffold_312_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7814..8524)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JE83_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58141.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_12_scaffold_312_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8769..9173)
DNA (405bp) protein (135aa)
TrmB family transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INZ9_NATPD
transcription regulator
TrmB family transcription regulator {ECO:0000313|EMBL:CAI50153.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas p
sw_12_scaffold_312_10
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9411..10562
DNA (1152bp) protein (384aa)
Rhodanese-like protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MQ08_HALMO
Rhodanese-like protein {ECO:0000313|EMBL:EMA46824.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307.
Zn-dependent hydrolase, glyoxylase
sw_12_scaffold_312_11
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10659..12188
DNA (1530bp) protein (510aa)
Multicopper oxidase type 3 n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEL7_9EURY
Multicopper oxidase type 3 {ECO:0000313|EMBL:ELZ32594.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidu
multicopper oxidase type 3 rbh
sw_12_scaffold_312_12
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12335..12784
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K027_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB38341.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_12_scaffold_312_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12843..14303)
DNA (1461bp) protein (487aa)
DNA repair protein Rad25 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD51_9EURY
DNA repair protein Rad25 {ECO:0000313|EMBL:EMA43278.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
type III restriction protein res subunit
sw_12_scaffold_312_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15041..15811
DNA (771bp) protein (257aa)
Protein GrpE n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBX5_9EURY
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
grpE; heat shock protein GrpE
sw_12_scaffold_312_15
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16031..17425
DNA (1395bp) protein (465aa)
carboxypeptidase id=24614248 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Carboxypeptidase {ECO:0000313|EMBL:ESP89331.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyr
carboxypeptidase
sw_12_scaffold_312_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18354..19373)
DNA (1020bp) protein (340aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJZ6_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA44780.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
bacterio-opsin activator HTH domain-containing protein
sw_12_scaffold_312_17
unknown

Not on your lists

19461..20090
DNA (630bp) protein (210aa)

This feature has no annotations

sw_12_scaffold_312_18
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20096..21199
DNA (1104bp) protein (368aa)
Transcription initiation factor IIB n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CVJ2_9EURY
tfbA; transcription initiation factor IIB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
sw_12_scaffold_312_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21265..22023
DNA (759bp) protein (253aa)
DNA binding domain-containing protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6W2_9EURY
DNA binding domain-containing protein {ECO:0000313|EMBL:EMA41532.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus ha
DNA binding domain-containing protein
sw_12_scaffold_312_20
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22199..23680
DNA (1482bp) protein (494aa)
Chaperone protein DnaK n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFR4_9EURY
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
molecular chaperone DnaK
Displaying 20 items

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