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sw_4_scaffold_626

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_626_1
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1..825)
DNA (825bp) protein (275aa)
Phosphate binding protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DEH5_9EURY
Phosphate binding protein {ECO:0000313|EMBL:ELZ33127.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM
phosphate binding protein
sw_4_scaffold_626_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1255..2109
DNA (855bp) protein (285aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
Ribosomal RNA large subunit methyltransferase E n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGA2_9EURY
ribosomal RNA methyltransferase RrmJ/FtsJ
sw_4_scaffold_626_3
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2116..2616)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W055_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY42702.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
sw_4_scaffold_626_4
unknown

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comp(2613..2885)
DNA (273bp) protein (91aa)

This feature has no annotations

sw_4_scaffold_626_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3183..3899)
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH16_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43725.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_626_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3981..4733)
DNA (753bp) protein (251aa)
Sec-independent periplasmic protein translocase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDB6_9EURY
Sec-independent periplasmic protein translocase {ECO:0000313|EMBL:EMA43726.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
tatC2; twin arginine translocation system subunit TatC
sw_4_scaffold_626_7
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4811..6247
DNA (1437bp) protein (479aa)
Ribonuclease E n=2 Tax=Pseudomonas aeruginosa E2 RepID=U9DPM5_PSEAI
Ribonuclease E {ECO:0000313|EMBL:AKE68912.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aeruginosa.;"
sw_4_scaffold_626_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6211..7020
DNA (810bp) protein (270aa)
Sec-independent protein translocase component TatC 1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC51_9EURY
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
tatC; twin-arginine translocation protein TatC
sw_4_scaffold_626_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7040..7393)
DNA (354bp) protein (118aa)
ABC transporter permease n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD94_9EURY
ABC transporter permease {ECO:0000313|EMBL:EMA43742.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
ABC transporter permease
sw_4_scaffold_626_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7727..8845)
DNA (1119bp) protein (373aa)
ORC1-type DNA replication protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MEG6_9EURY
ORC1-type DNA replication protein {ECO:0000256|HAMAP-Rule:MF_01407}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
cdc6; cell division control protein 6
sw_4_scaffold_626_11
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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9825..13379
DNA (3555bp) protein (1185aa)
Signal-transducing histidine kinase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W754_9EURY
Signal-transducing histidine kinase {ECO:0000313|EMBL:ELY44163.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bang
multi-sensor signal transduction histidine kinase
sw_4_scaffold_626_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13569..15260)
DNA (1692bp) protein (564aa)
DNA-binding protein MutS2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBB6_9EURY
DNA-binding protein MutS2 {ECO:0000256|HAMAP-Rule:MF_00971}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
mutS2; mismatch repair protein
sw_4_scaffold_626_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15649..16578
DNA (930bp) protein (310aa)
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NEN0_9EURY
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase {ECO:0000313|EMBL:EMA55145.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase
sw_4_scaffold_626_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16566..17183)
DNA (618bp) protein (206aa)
cobC; probable adenosylcobalamin 5'-phosphate phosphatase / alpha-ribazole 5'-phosphate phosphatase (EC:3.1.3.73)
Fructose-2,6-bisphosphatase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDH9_9EURY
Fructose-2,6-bisphosphatase {ECO:0000313|EMBL:EMA55144.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
sw_4_scaffold_626_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17318..17476
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD89_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43737.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
small CPxCG-related zinc finger protein
sw_4_scaffold_626_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17473..18789)
DNA (1317bp) protein (439aa)
Phosphoglucosamine mutase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB00_9EURY
Phosphoglucosamine mutase {ECO:0000313|EMBL:EMA55142.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DS
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
sw_4_scaffold_626_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18860..19156)
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAZ5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55137.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
Displaying 17 items

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