ggKbase home page

sw_4_scaffold_703

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_703_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(1..360)
DNA (360bp) protein (120aa)
30S ribosomal protein S15 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MZ33_9EURY
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
rps15p; 30S ribosomal protein S15
sw_4_scaffold_703_trna_1
unknown

Not on your lists

545..616
DNA (72bp)
transferRNA
sw_4_scaffold_703_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

977..1384
DNA (408bp) protein (136aa)
Alkaline phosphatase-like protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D324_9EURY
Alkaline phosphatase-like protein {ECO:0000313|EMBL:ELZ28524.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum
extracellular nuclease
sw_4_scaffold_703_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1581..2258
DNA (678bp) protein (226aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; EC=2.3.3.16 {ECO:0000256|PIRNR:PIRNR001369};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococc
Citrate synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJM3_9EURY
2-methylcitrate synthase/citrate synthase II
sw_4_scaffold_703_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2218..2583
DNA (366bp) protein (122aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; EC=2.3.3.16 {ECO:0000256|PIRNR:PIRNR001369};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococc
citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJM3_9EURY
sw_4_scaffold_703_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3031..3861
DNA (831bp) protein (277aa)
Aldo/keto reductase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIA9_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:EMA45447.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
aldo/keto reductase
sw_4_scaffold_703_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3917..4111
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5B7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52748.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_703_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4203..5174
DNA (972bp) protein (324aa)
Phosphoadenosine phosphosulfate reductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6I9_9EURY
Phosphoadenosine phosphosulfate reductase {ECO:0000313|EMBL:EMA52749.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
phosphoadenosine phosphosulfate reductase
sw_4_scaffold_703_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5462..6229)
DNA (768bp) protein (256aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156};; Ketopantoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_001
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7U8_9EURY
sw_4_scaffold_703_9
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6343..7035)
DNA (693bp) protein (231aa)
Oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4D8_9EURY
Oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:EMA52751.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
aldo/keto reductase
sw_4_scaffold_703_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7150..7599)
DNA (450bp) protein (150aa)
Oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4D8_9EURY
Oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:EMA52751.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
oxidoreductase, aryl-alcohol dehydrogenase like protein
sw_4_scaffold_703_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7601..8338
DNA (738bp) protein (246aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
proteasome endopeptidase complex subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJA8_9EURY
sw_4_scaffold_703_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8331..9041
DNA (711bp) protein (237aa)
Proteasome subunit beta {ECO:0000256|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit {ECO:0000256|HAMAP-Rule:MF_02113}; Proteasome core protein PsmB {
psmB; proteasome beta subunit (EC:3.4.25.1)
Proteasome subunit beta n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIA3_9EURY
sw_4_scaffold_703_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9181..9417
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLX4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45440.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_703_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9431..9982)
DNA (552bp) protein (184aa)
Phosphoglycolate phosphatase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML27_9EURY
Phosphoglycolate phosphatase {ECO:0000313|EMBL:EMA45439.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
haloacid dehalogenase superfamily enzyme, subfamily IA
sw_4_scaffold_703_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10032..11180)
DNA (1149bp) protein (383aa)
Acyl-CoA dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N487_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA52757.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8
acyl-CoA dehydrogenase
sw_4_scaffold_703_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11280..11792)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5C7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52758.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
transcription factor of MBF1-like protein
sw_4_scaffold_703_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11874..12710)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIC1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45436.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_4_scaffold_703_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12917..13231
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4E8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52761.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_703_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13267..13899)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N491_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52762.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_703_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14243..14509)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5D2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52763.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_703_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14607..14888
DNA (282bp) protein (94aa)
50S ribosomal protein L44e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6K3_9EURY
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
rpl44e; 50S ribosomal protein L44e
sw_4_scaffold_703_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14891..15097
DNA (207bp) protein (69aa)
30S ribosomal protein S27e n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7W4_9EURY
30S ribosomal protein S27e {ECO:0000256|HAMAP-Rule:MF_00371, ECO:0000256|RuleBase:RU000671}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
rps27R; 30S ribosomal protein S27.eR
sw_4_scaffold_703_23
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15094..15891
DNA (798bp) protein (266aa)
Translation initiation factor IF-2 subunit alpha n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLW3_9EURY
Translation initiation factor IF-2 subunit alpha {ECO:0000313|EMBL:EMA45430.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Ha
translation initiation factor IF-2 subunit alpha
sw_4_scaffold_703_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15908..16090
DNA (183bp) protein (61aa)
Ribosome biogenesis protein Nop10 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N496_9EURY
Ribosome biogenesis protein Nop10 {ECO:0000256|HAMAP-Rule:MF_00803}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
zn-ribbon RNA-binding protein
sw_4_scaffold_703_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16094..16843
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ94_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45428.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
3-isopropylmalate dehydratase
sw_4_scaffold_703_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17061..17795)
DNA (735bp) protein (245aa)
RNA methyltransferase, TrmH family, group 1 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6K7_9EURY
RNA methyltransferase, TrmH family, group 1 {ECO:0000313|EMBL:EMA52769.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
RNA methyltransferase, TrmH family, group 1
sw_4_scaffold_703_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17795..18292)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7W8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52770.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_4_scaffold_703_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18694..19506
DNA (813bp) protein (271aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013};; IGP synthase cyclase subunit {ECO:0000256|HAMAP-Rule:MF_01013}; IGP
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NAH9_9EURY
hisF; Imidazole glycerol phosphate synthase cyclase subunit
sw_4_scaffold_703_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19591..20139
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI64_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45013.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
Displaying items 1-30 of 31 in total

View Taxonomy