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SW_4_Halosimplex_carlsbadense_69_24

In projects: SW_4  |  diaphorachaeota  |  archaea_ggkbase

Consensus taxonomy: Halosimplex carlsbadense  →  Halosimplex  →  Halobacteriales  →  Halobacteria  →  Euryarchaeota  →  Archaea

Taxonomy override: Euryarchaeota

Displaying items 151-175 of 175 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
sw_4_scaffold_3301
Species: Halosimplex carlsbadense (50%)
2 3324 bp 71.66 26.59 93.68
sw_4_scaffold_1205
Genus: Haloarcula (66.67%)
3 5696 bp 69.87 22.81 93.70
sw_4_scaffold_666
Species: Halosimplex carlsbadense (87.5%)
8 8253 bp 70.00 24.79 93.82
sw_4_scaffold_1872
Species: Halosimplex carlsbadense (77.78%)
9 6684 bp 67.24 25.00 93.85
sw_4_scaffold_2797
Species: Halosimplex carlsbadense (75%)
4 3639 bp 70.13 21.90 93.90
sw_4_scaffold_6636
Order: Halobacteriales (100%)
5 4658 bp 69.43 24.81 94.10
sw_4_scaffold_428
Species: Halosimplex carlsbadense (66.67%)
6 10094 bp 65.94 30.03 94.13
sw_4_scaffold_3320
Species: Halosimplex carlsbadense (66.67%)
6 4470 bp 69.69 27.02 94.23
sw_4_scaffold_1611
Species: Halosimplex carlsbadense (75%)
8 6496 bp 70.46 22.64 94.44
sw_4_scaffold_2110
Class: Halobacteria (100%)
5 4217 bp 71.45 25.30 94.62
sw_4_scaffold_3446
Species: Halosimplex carlsbadense (60%)
5 4494 bp 66.49 20.16 94.73
sw_4_scaffold_6832
Species: Halosimplex carlsbadense (66.67%)
6 3652 bp 71.08 23.82 94.80
sw_4_scaffold_4249
Species: Halosimplex carlsbadense (75%)
4 4092 bp 68.82 24.14 94.89
sw_4_scaffold_7638
Species: Halosimplex carlsbadense (75%)
4 3631 bp 71.99 22.12 95.02
sw_4_scaffold_1787
Species: Halogeometricum pallidum (100%)
6 5498 bp 65.33 20.53 95.11
sw_4_scaffold_7056
Order: Halobacteriales (66.67%)
3 3129 bp 66.67 25.54 95.49
sw_4_scaffold_2281
Order: Halobacteriales (83.33%)
6 6107 bp 67.95 25.51 95.55
sw_4_scaffold_2444
Species: Halorhabdus utahensis (50%)
4 3901 bp 67.14 26.40 95.59
sw_4_scaffold_4561
Order: Halobacteriales (75%)
4 3739 bp 68.60 19.63 95.72
sw_4_scaffold_3630
Species: Halosimplex carlsbadense (100%)
3 3655 bp 69.77 19.05 95.87
sw_4_scaffold_3892
Species: Halosimplex carlsbadense (75%)
4 3018 bp 67.66 25.78 95.92
sw_4_scaffold_1751
Species: Natronomonas moolapensis (50%)
4 4672 bp 68.99 24.92 96.83
sw_4_scaffold_8715
Species: Halosimplex carlsbadense (75%)
4 5049 bp 70.37 20.80 97.15
sw_4_scaffold_2842
Species: Halosimplex carlsbadense (66.67%)
6 5500 bp 69.56 24.53 99.38
sw_4_scaffold_1087
Order: Halobacteriales (60%)
5 5981 bp 69.32 22.89 99.97
Displaying items 151-175 of 175 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.