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sw_4_scaffold_2960

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_2960_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(164..955)
DNA (792bp) protein (264aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR23_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ24334.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_4_scaffold_2960_2
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1081..1728
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8C3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN01653.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_4_scaffold_2960_3
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1718..2323
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X6G6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY57011.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical membrane protein
sw_4_scaffold_2960_4
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2332..3258)
DNA (927bp) protein (309aa)
UDP-glucose 4-epimerase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LD32_HALJP
UDP-glucose 4-epimerase {ECO:0000313|EMBL:EMA30354.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
UDP-glucose 4-epimerase
sw_4_scaffold_2960_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3940..4698
DNA (759bp) protein (253aa)
Putative transcriptional regulator n=1 Tax=halophilic archaeon J07HX64 RepID=U1QRV7_9EURY
Putative transcriptional regulator {ECO:0000313|EMBL:ERH09918.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
putative transcriptional regulator
sw_4_scaffold_2960_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5032..5715
DNA (684bp) protein (228aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000313|EMBL:ELZ27303.1}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_0
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXD3_9EURY
sw_4_scaffold_2960_7
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5841..6548
DNA (708bp) protein (236aa)
UspA domain protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PA36_9EURY
UspA domain protein
UspA domain protein {ECO:0000313|EMBL:EMA66718.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
sw_4_scaffold_2960_8
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6545..7489)
DNA (945bp) protein (315aa)
Amino acid transport protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P989_9EURY
Amino acid transport protein {ECO:0000313|EMBL:EMA66717.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 149
cat5; transport protein (probable substrate cationic amino acids)
sw_4_scaffold_2960_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7955..8389)
DNA (435bp) protein (145aa)
NUDIX hydrolase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR08_9EURY
NUDIX hydrolase {ECO:0000313|EMBL:ELZ25695.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
NUDIX hydrolase
sw_4_scaffold_2960_10
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


8536..8895
DNA (360bp) protein (120aa)
30S ribosomal protein S10 id=24649826 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
30S ribosomal protein S10
sw_4_scaffold_2960_11
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8989..9561)
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AKJ9_NATGS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ73570.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacterium gregoryi (s
sw_4_scaffold_2960_12
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9624..10421
DNA (798bp) protein (266aa)
S-adenosylmethionine hydroxide adenosyltransferase family protein n=2 Tax=Halobacterium salinarum RepID=B0R327_HALS3
hypothetical protein
S-adenosylmethionine hydroxide adenosyltransferase family protein {ECO:0000313|EMBL:CAP13137.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobact
sw_4_scaffold_2960_13
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10483..11202)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZZM0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58493.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_4_scaffold_2960_14
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11343..11783
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LSS2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA35449.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
Displaying 14 items

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