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sw_4_scaffold_3821

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_4_scaffold_3821_1
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3..236)
DNA (234bp) protein (78aa)
NUDIX hydrolase family protein (EC:3.6.1.13)
NUDIX hydrolase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WF11_9EURY
NUDIX hydrolase {ECO:0000313|EMBL:ELY47871.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 10635.;"
sw_4_scaffold_3821_2
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(348..770)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LVH4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA37562.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
FG-GAP repeat protein
sw_4_scaffold_3821_3
Tetrapisispora blattae, Tetrapisispora, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

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1107..1757
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Tetrapisispora blattae (strain ATCC 34711 / CBS 6284 / DSM 70876 / NBRC 10599 / NRRL Y-10934 / UCD 77-7) RepID=I2GXK0_TETBL
TBLA0A10760; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH58852.1}; TaxID=1071380 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Tetrapisi
sw_4_scaffold_3821_4
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1723..2505)
DNA (783bp) protein (261aa)
Beta-carotene 15,15''-monooxygenase, Brp/Blh family n=1 Tax=halophilic archaeon J07HX5 RepID=U1P631_9EURY
Beta-carotene 15,15''-monooxygenase, Brp/Blh family {ECO:0000313|EMBL:ERG89007.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
beta-carotene 15,15''-monooxygenase, Brp/Blh family
sw_4_scaffold_3821_5
unknown

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2803..3081
DNA (279bp) protein (93aa)

This feature has no annotations

sw_4_scaffold_3821_6
unknown

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3169..3423
DNA (255bp) protein (85aa)

This feature has no annotations

sw_4_scaffold_3821_7
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3799..5796)
DNA (1998bp) protein (666aa)
bat; receiver/sensor/bat box HTH-10 family transcription regulator Bat (homolog to bacterioopsin activator) id=24646775 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
PAS sensor histidine kinase {ECO:0000313|EMBL:ERH10939.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
PAS domain-containing protein
sw_4_scaffold_3821_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5886..6755)
DNA (870bp) protein (290aa)
hop; halorhodopsin; K04642 halorhodopsin id=24646773 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Bacteriorhodopsin {ECO:0000313|EMBL:ERH10937.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hop; halorhodopsin
sw_4_scaffold_3821_9
unknown

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comp(6967..7647)
DNA (681bp) protein (227aa)

This feature has no annotations

sw_4_scaffold_3821_10
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7775..8287
DNA (513bp) protein (171aa)
Potassium transporter peripheral membrane component n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P0G7_9EURY
Potassium transporter peripheral membrane component {ECO:0000313|EMBL:EMA63338.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Hal
trkA; potassium transporter peripheral membrane component
sw_4_scaffold_3821_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8289..9797
DNA (1509bp) protein (503aa)
Trk-type transport system (Probable substrate potassium) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMW3_NATPD
tp29u2_1; Trk-type transport system ( substrate potassium) 1, subunit 2.1
Trk-type transport system (Probable substrate potassium) {ECO:0000313|EMBL:CAI50543.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" s
Displaying 11 items

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