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sw_5_scaffold_2614

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_2614_1
unknown

Not on your lists

comp(3..107)
DNA (105bp) protein (35aa)

This feature has no annotations

sw_5_scaffold_2614_2
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

217..681
DNA (465bp) protein (155aa)
UspA domain-containing protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z3Z2_9EURY
UspA domain-containing protein {ECO:0000313|EMBL:ELY80606.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751
UspA domain-containing protein
sw_5_scaffold_2614_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

755..1120
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWW6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27695.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
UspA domain protein
sw_5_scaffold_2614_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1142..1507)
DNA (366bp) protein (122aa)
Homolog to lactoylglutathione lyase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IR28_NATPD
glo_4; lyase/dioxygenase
Glyoxalase domain protein {ECO:0000313|EMBL:CAI49416.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (
sw_5_scaffold_2614_5
unknown

Not on your lists

1617..2090
DNA (474bp) protein (158aa)

This feature has no annotations

sw_5_scaffold_2614_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2187..3410
DNA (1224bp) protein (408aa)
hypothetical protein n=1 Tax=Haladaptatus paucihalophilus RepID=UPI00037FD6B9
WD40-like protein repeat-like protein {ECO:0000313|EMBL:EFW91517.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
WD40-like repeat protein
sw_5_scaffold_2614_7
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3499..4533)
DNA (1035bp) protein (345aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EMA25030.1}; EC=1.2.1.11 {ECO:0000313|EMBL:EMA25030.1};; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteri
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KZ29_9EURY
sw_5_scaffold_2614_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4603..5631)
DNA (1029bp) protein (343aa)
Hydrolase ( hydroxyacylglutathione hydrolase ) 11 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N0H3_9EURY
Hydrolase ( hydroxyacylglutathione hydrolase ) 11 {ECO:0000313|EMBL:EMA51482.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
beta-lactamase
sw_5_scaffold_2614_9
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5628..6926)
DNA (1299bp) protein (433aa)
Major facilitator superfamily protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BMU6_9EURY
MFS transporter {ECO:0000313|EMBL:KDE58116.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
sugar phosphate permease
sw_5_scaffold_2614_10
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7026..7451)
DNA (426bp) protein (142aa)
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_02131}; Short=HPPK {ECO:0000256|HAMAP-Rule:MF_02131};; EC=2.7.6.3 {ECO:0000256|HAMAP-Rule:MF_02131};; 2-amino-4-hydroxy-6
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LNN8_HALLT
hypothetical protein
sw_5_scaffold_2614_11
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7918..8289
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=L9VIB5_HALVD
Uncharacterized protein {ECO:0000313|EMBL:ELY36940.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 2
hypothetical protein
sw_5_scaffold_2614_12
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8383..9201)
DNA (819bp) protein (273aa)
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DHS5_9EURY
Dihydropteroate synthase {ECO:0000313|EMBL:ELZ35031.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
sw_5_scaffold_2614_13
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9177..9437)
DNA (261bp) protein (87aa)
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P4T8_9EURY
Dihydropteroate synthase {ECO:0000313|EMBL:EMA63845.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 219
sw_5_scaffold_2614_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9493..10686
DNA (1194bp) protein (398aa)
Glutamate--cysteine ligase {ECO:0000256|HAMAP-Rule:MF_01609}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_01609};; Gamma-glutamylcysteine synthetase {ECO:0000256|HAMAP-Rule:MF_01609}; TaxID=1227456 species=
Carboxylate-amine ligase C450_00700 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0ND87_9EURY
carboxylate-amine ligase
sw_5_scaffold_2614_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10817..11329
DNA (513bp) protein (171aa)
transcriptional regulator n=1 Tax=Halomicrobium katesii RepID=UPI0003799F22
TrmB family transcription regulator
TrmB family transcription regulator {ECO:0000313|EMBL:CCQ36438.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas m
sw_5_scaffold_2614_16
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11382..11885
DNA (504bp) protein (168aa)
Phosphopantetheine adenylyltransferase n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GG68_9EURY
Nicotinate-nucleotide adenylyltransferase {ECO:0000313|EMBL:CQR49828.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp.
cytidyltransferase-related enzyme
sw_5_scaffold_2614_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11907..12215)
DNA (309bp) protein (103aa)
Cyclin domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPK1_NATPD
tfbA_4; transcription initiation factor TFB 4
Cyclin domain protein {ECO:0000313|EMBL:CAI49950.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
sw_5_scaffold_2614_18
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12702..13241
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3F007_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61292.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_5_scaffold_2614_trna_1
unknown

Not on your lists

13284..13367
DNA (84bp)
transferRNA
sw_5_scaffold_2614_19

Not on your lists

13915..14928
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4XTQ4_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS11959.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
sw_5_scaffold_2614_20
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15786..16952
DNA (1167bp) protein (389aa)
UbiA prenyltransferase n=1 Tax=halophilic archaeon J07HB67 RepID=U1PSJ3_9EURY
UbiA prenyltransferase {ECO:0000313|EMBL:ERH13411.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
lycopene cyclase domain
sw_5_scaffold_2614_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17017..17580
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY79_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28175.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_5_scaffold_2614_22
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17783..19345)
DNA (1563bp) protein (521aa)
Lignostilbene-alpha,beta-dioxygenase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5K7_9EURY
Lignostilbene-alpha,beta-dioxygenase {ECO:0000313|EMBL:EMA51965.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus tha
lignostilbene-alpha,beta-dioxygenase-like enzyme
sw_5_scaffold_2614_23
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19433..20254
DNA (822bp) protein (274aa)
Ribonuclease P protein component 3 {ECO:0000256|HAMAP-Rule:MF_00756}; Short=RNase P component 3 {ECO:0000256|HAMAP-Rule:MF_00756};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00756};; Rpp30 {ECO:0000256|H
rnp3; ribonuclease P protein component 3 (EC:3.1.26.5)
Ribonuclease P protein component 3 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QYM4_9EURY
sw_5_scaffold_2614_24
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20238..20942
DNA (705bp) protein (235aa)
Methyltransferase type 11 n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W3P2_9EURY
Methyltransferase type 11 {ECO:0000313|EMBL:ELY43921.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 1
methylase involved in ubiquinone/menaquinone biosynthesis
sw_5_scaffold_2614_25
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20945..21358
DNA (414bp) protein (138aa)
Ribonuclease P protein component 2 {ECO:0000256|HAMAP-Rule:MF_00755}; Short=RNase P component 2 {ECO:0000256|HAMAP-Rule:MF_00755};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00755};; Pop5 {ECO:0000256|HA
Ribonuclease P protein component 2 n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C3M2_9EURY
ribonuclease P-related protein
sw_5_scaffold_2614_26
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21426..22169
DNA (744bp) protein (248aa)
psmA4; proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
Proteasome subunit alpha n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JMU9_HALVA
Displaying 27 items

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