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sw_5_scaffold_3296

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_3296_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..640
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLC2_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37454.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_3296_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(992..1228)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXL0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27177.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
sw_5_scaffold_3296_3
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1308..2300
DNA (993bp) protein (331aa)
Signal peptide peptidase SppA, 36K type n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XFA9_9EURY
Signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:ELY60405.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus
sppA_1; signal peptide peptidase
sw_5_scaffold_3296_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2476..3423
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0H1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ28177.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_5_scaffold_3296_5
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3462..4178
DNA (717bp) protein (239aa)
ATP binding protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9YCL3_9EURY
ATP binding protein {ECO:0000313|EMBL:ELY71447.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein
sw_5_scaffold_3296_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4183..4359)
DNA (177bp) protein (59aa)
graD; sugar nucleotidyltransferase (EC:2.7.7.-)
Sugar nucleotidyltransferase {ECO:0000313|EMBL:CCQ35629.1}; EC=2.7.7.- {ECO:0000313|EMBL:CCQ35629.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
Sugar nucleotidyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNV8_NATM8
sw_5_scaffold_3296_7
unknown

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4397..5161
DNA (765bp) protein (255aa)

This feature has no annotations

sw_5_scaffold_3296_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5197..6141
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XYR8_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35273.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_3296_9
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6138..6602)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9X6L3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY57350.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
hypothetical protein
sw_5_scaffold_3296_10
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6599..8296)
DNA (1698bp) protein (566aa)
DNA polymerase IV n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V479_HALMA
polX; DNA polymerase IV
DNA polymerase IV {ECO:0000313|EMBL:EMA11684.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33799.
sw_5_scaffold_3296_11
unknown

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8496..8729
DNA (234bp) protein (78aa)

This feature has no annotations

sw_5_scaffold_3296_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9212..10144
DNA (933bp) protein (311aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160314}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00562, ECO:0000256|SAAS:SAAS00160312};; TaxID=1227455 species="Archa
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGR9_9EURY
hypothetical protein
sw_5_scaffold_3296_13
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10285..10854
DNA (570bp) protein (190aa)
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKF40106.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source=
sw_5_scaffold_3296_14
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11140..12348
DNA (1209bp) protein (403aa)
Cell division protein FtsZ n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XN79_NATM8
ftsZ1; cell division protein FtsZ, type I
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
sw_5_scaffold_3296_15
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12479..12652
DNA (174bp) protein (58aa)
Protein translocase subunit SecE n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P127_HALMD
protein translocase SEC61 complex subunit gamma
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=485914 species="Archaea; Euryarchaeot
sw_5_scaffold_3296_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12652..12954
DNA (303bp) protein (101aa)
Transcription elongation factor Spt5 n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CVY0_9EURY
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimple
NusG antitermination factor
Displaying 16 items

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