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sw_6_scaffold_396

Search features with annotation key words

Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_396_1
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..193
DNA (192bp) protein (64aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halobacterium sp. DL1 RepID=G4IGI1_9EURY
NAD-dependent epimerase
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EMA25373.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amyl
sw_6_scaffold_396_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(212..829)
DNA (618bp) protein (206aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUA2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92181.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_6_scaffold_396_trna_1
unknown

Not on your lists

comp(1442..1514)
DNA (73bp)
transferRNA
sw_6_scaffold_396_3
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1609..2202
DNA (594bp) protein (198aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QU99_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92178.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
sw_6_scaffold_396_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2958..4421
DNA (1464bp) protein (488aa)
Replication factor A n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QU98_9EURY
Replication factor A {ECO:0000313|EMBL:EFW92177.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus
OB-fold tRNA/helicase-type nucleic acid binding protein
sw_6_scaffold_396_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4522..4764)
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QU97_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFW92176.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
sw_6_scaffold_396_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4878..6272
DNA (1395bp) protein (465aa)
Histone deacetylase superfamily protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QU95_9EURY
Histone deacetylase superfamily protein {ECO:0000313|EMBL:EFW92174.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptat
hdal; HdaI-type histone deacetylase
sw_6_scaffold_396_7
unknown

Not on your lists

comp(6297..6689)
DNA (393bp) protein (131aa)

This feature has no annotations

sw_6_scaffold_396_8
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6902..9424)
DNA (2523bp) protein (841aa)
Zinc-transporting ATPase n=3 Tax=Haloferax RepID=M0FI21_9EURY
Zinc-transporting ATPase {ECO:0000313|EMBL:ELZ59575.1}; TaxID=1227464 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-646.;"
zntA3; zinc-transporting ATPase
sw_6_scaffold_396_9
unknown

Not on your lists

9699..9815
DNA (117bp) protein (39aa)

This feature has no annotations

sw_6_scaffold_396_10
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10105..10296)
DNA (192bp) protein (64aa)
Uncharacterized protein {ECO:0000313|EMBL:ACM58042.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
sw_6_scaffold_396_11
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10527..11129
DNA (603bp) protein (201aa)
AMMECR1 domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUC8_9EURY
AMMECR1 domain protein {ECO:0000313|EMBL:EFW92207.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilu
AMMECR1 domain-containing protein
sw_6_scaffold_396_12
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11180..12328)
DNA (1149bp) protein (383aa)
pncB; nicotinate phosphoribosyltransferase (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A0W8_9EURY
Nicotinate phosphoribosyltransferase {ECO:0000313|EMBL:GAD51289.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH
sw_6_scaffold_396_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12459..13976)
DNA (1518bp) protein (506aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUD0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92209.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_6_scaffold_396_14
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14143..14715
DNA (573bp) protein (191aa)
Isochorismatase hydrolase n=1 Tax=Halobacterium sp. DL1 RepID=G4IB78_9EURY
Cysteine hydrolase {ECO:0000313|EMBL:AHG02671.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
isochorismatase hydrolase
sw_6_scaffold_396_15
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14900..15340
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JEI4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58389.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_6_scaffold_396_16
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15353..16210)
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0K595_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF25321.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_6_scaffold_396_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16266..16967
DNA (702bp) protein (234aa)
Biotin/lipoate A/B protein ligase family domain protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUD4_9EURY
Biotin/lipoate A/B protein ligase family domain protein {ECO:0000313|EMBL:EFW92213.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" so
lipoate-protein ligase A
sw_6_scaffold_396_18
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17141..18307
DNA (1167bp) protein (389aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=797209 species="Archaea; Euryarchaeota; Halobact
Dihydroorotase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUD5_9EURY
dihydroorotase
sw_6_scaffold_396_19
unknown

Not on your lists

comp(18347..18505)
DNA (159bp) protein (53aa)

This feature has no annotations

sw_6_scaffold_396_20
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18587..18931)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUD9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92218.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_6_scaffold_396_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18934..19899)
DNA (966bp) protein (322aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MD24_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:EMA43253.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcu
dppC; oligopeptide transport system permease OppC
sw_6_scaffold_396_22
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19896..20909)
DNA (1014bp) protein (338aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUE1_9EURY
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EFW92220.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halad
dppB; ABC-type dipeptide/oligopeptide/nickel transport systems, permease protein
sw_6_scaffold_396_23
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21008..22186)
DNA (1179bp) protein (393aa)
Peptide ABC transporter substrate-binding protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZZD2_9EURY
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:EJN58398.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salari
peptide ABC transporter substrate-binding protein
Displaying 24 items

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