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sw_6_scaffold_112

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_112_1
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..2030
DNA (2028bp) protein (676aa)
deoxyribodipyrimidine photo-lyase (EC:4.1.99.3)
Deoxyribodipyrimidine photolyase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CG81_9EURY
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:ELZ22261.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsb
sw_6_scaffold_112_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2035..2550)
DNA (516bp) protein (172aa)
HTH domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISR4_NATPD
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CAI48821.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_6_scaffold_112_3
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2588..3424)
DNA (837bp) protein (279aa)
Alpha/beta hydrolase fold protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9Y2A5_9EURY
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ELY67821.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM
alpha/beta hydrolase fold protein
sw_6_scaffold_112_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3424..4563)
DNA (1140bp) protein (380aa)
Acyl-CoA dehydrogenase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N4M6_9EURY
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EMA52049.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM
acyl-CoA dehydrogenase
sw_6_scaffold_112_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4642..5433)
DNA (792bp) protein (264aa)
fadA_5; enoyl-CoA hydratase I 5 (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:CAI48822.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CAI48822.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomon
Enoyl-CoA hydratase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISR3_NATPD
sw_6_scaffold_112_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5496..6257)
DNA (762bp) protein (254aa)
dehydrogenase/reductase 6 (EC:1.1.1.-)
Probable oxidoreductase (Short-chain dehydrogenase family) {ECO:0000313|EMBL:CAI50174.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAI50174.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobac
Probable oxidoreductase (Short-chain dehydrogenase family) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INX8_NATPD
sw_6_scaffold_112_7
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6782..8179
DNA (1398bp) protein (466aa)
Deoxyribodipyrimidine photo-lyase type i n=1 Tax=Halogranum salarium B-1 RepID=J3JF14_9EURY
Deoxyribodipyrimidine photo-lyase type i {ECO:0000313|EMBL:EJN58859.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
deoxyribodipyrimidine photo-lyase type i
sw_6_scaffold_112_8
unknown

Not on your lists

8210..8722
DNA (513bp) protein (171aa)

This feature has no annotations

sw_6_scaffold_112_9
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8821..9432
DNA (612bp) protein (204aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;
Superoxide dismutase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JLZ0_NATP1
superoxide dismutase
sw_6_scaffold_112_10
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9527..9817
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NRT8_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV13043.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_6_scaffold_112_11
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9814..10659
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KX50_HALAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA24325.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
sw_6_scaffold_112_12
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10670..11278)
DNA (609bp) protein (203aa)
Beta-lactamase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M1I2_9EURY
Beta-lactamase {ECO:0000313|EMBL:EMA39521.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM 10879.;"
Zn-dependent hydrolase, glyoxylase
sw_6_scaffold_112_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11364..12347
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XSA8_NATM8
hypothetical protein
DUF1119 family protein {ECO:0000313|EMBL:CCQ37238.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (s
sw_6_scaffold_112_14
Haloferax lucentense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12348..13340)
DNA (993bp) protein (331aa)
ocd1; ornithine cyclodeaminase (EC:4.3.1.12)
Ornithine cyclodeaminase n=2 Tax=Haloferax RepID=M0H6I2_HALL2
Ornithine cyclodeaminase {ECO:0000313|EMBL:ELZ78709.1}; TaxID=1230452 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax lucentense (strain DS
sw_6_scaffold_112_15
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13494..13709)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0L1D2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA27356.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
sw_6_scaffold_112_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13840..14244)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6B4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41241.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_6_scaffold_112_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14269..14850)
DNA (582bp) protein (194aa)
Methyl transferase-like protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYC3_9EURY
Methyl transferase-like protein {ECO:0000313|EMBL:ELZ27432.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsba
methyltransferase type 11
sw_6_scaffold_112_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14908..15456
DNA (549bp) protein (183aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJY1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44765.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
GCN5-like N-acetyltransferase
sw_6_scaffold_112_19
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15507..16388
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W971_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN02443.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_6_scaffold_112_20
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16440..17423
DNA (984bp) protein (328aa)
Flap endonuclease 1 {ECO:0000255|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000255|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000255|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
Flap endonuclease 1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=FEN_NATPD
fen; flap endonuclease-1
sw_6_scaffold_112_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17477..17707
DNA (231bp) protein (77aa)
BolA family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPH0_NATPD
bolA; morphology/transcription regulator BolA family protein
BolA family protein {ECO:0000313|EMBL:CAI49981.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_6_scaffold_112_22
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17834..18886)
DNA (1053bp) protein (351aa)
Transcriptional regulator, TrmB n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQA9_9EURY
Transcriptional regulator, TrmB {ECO:0000313|EMBL:EFW93173.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauci
TrmB family transcriptional regulator
sw_6_scaffold_112_23
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18936..19568)
DNA (633bp) protein (211aa)
PyrE-like protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QY14_9EURY
PyrE-like protein {ECO:0000256|HAMAP-Rule:MF_01214}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
pyrE2; homolog to orotate phosphoribosyltransferase
sw_6_scaffold_112_24
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19565..20623)
DNA (1059bp) protein (353aa)
glucose 1-dehydrogenase (EC:1.1.1.47)
Glucose 1-dehydrogenase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QY13_9EURY
Alcohol dehydrogenase GroES domain protein {ECO:0000313|EMBL:EFW90479.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladap
sw_6_scaffold_112_25
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20709..21899
DNA (1191bp) protein (397aa)
Haloacid dehalogenase domain protein hydrolase type 3 n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CEZ6_9EURY
Haloacid dehalogenase domain protein hydrolase type 3 {ECO:0000313|EMBL:ELZ20439.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="
hypothetical protein
sw_6_scaffold_112_26
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22365..22793)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LLP3_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA32945.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_6_scaffold_112_27
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22940..23248
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W1M6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY42218.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
hypothetical protein
sw_6_scaffold_112_28
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23280..24203
DNA (924bp) protein (308aa)
Alpha/beta hydrolase fold protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KW63_HALAR
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EMA24464.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argent
alpha/beta hydrolase fold protein
sw_6_scaffold_112_29
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24253..24522)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CBI7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20646.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_112_30
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24616..24891
DNA (276bp) protein (92aa)
PadR family transcription regulator n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKH0_NATM8
padR3; PadR family transcription regulator
PadR family transcription regulator {ECO:0000313|EMBL:CCQ35879.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas m
Displaying items 1-30 of 38 in total

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