ggKbase home page

sw_6_scaffold_688

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_688_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..432
DNA (432bp) protein (144aa)
pdaD; pyruvoyl-dependent arginine decarboxylase (EC:4.1.1.19)
Pyruvoyl-dependent arginine decarboxylase {ECO:0000313|EMBL:CCQ37057.1}; EC=4.1.1.19 {ECO:0000313|EMBL:CCQ37057.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Haloba
Pyruvoyl-dependent arginine decarboxylase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XS26_NATM8
sw_6_scaffold_688_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

492..815
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y3H6_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37056.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_6_scaffold_688_3
unknown

Not on your lists

comp(812..988)
DNA (177bp) protein (59aa)

This feature has no annotations

sw_6_scaffold_688_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1103..2917)
DNA (1815bp) protein (605aa)
Probable translation initiation factor IF-2 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=IF2P_NATPD
tif5B; translation initiation factor IF-2
Probable translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Na
sw_6_scaffold_688_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3284..4126
DNA (843bp) protein (281aa)
Single-stranded-DNA-specific exonuclease RecJ1 {ECO:0000313|EMBL:CAI48192.1}; EC=3.1.-.- {ECO:0000313|EMBL:CAI48192.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
Single-stranded-DNA-specific exonuclease RecJ1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUI8_NATPD
recJ; single-stranded-DNA-specific exonuclease
sw_6_scaffold_688_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4168..4620
DNA (453bp) protein (151aa)
Single-stranded-DNA-specific exonuclease RecJ1 {ECO:0000313|EMBL:CAI48192.1}; EC=3.1.-.- {ECO:0000313|EMBL:CAI48192.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
Single-stranded-DNA-specific exonuclease RecJ1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUI8_NATPD
recJ; single-stranded-DNA-specific exonuclease
sw_6_scaffold_688_7
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4778..6445
DNA (1668bp) protein (556aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617}; EC=6.5.1.1 {ECO:0000256|HAMAP-Rule:MF_00407, ECO:0000256|RuleBase:RU000617};; Polydeoxyribonucleotide synthase [ATP] {ECO:0
DNA ligase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CZ81_9EURY
CDC9; ATP-dependent DNA ligase
sw_6_scaffold_688_8
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6442..7428
DNA (987bp) protein (329aa)
mRNA 3'-end processing factor n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9WWR2_9EURY
mRNA 3'-end processing factor {ECO:0000313|EMBL:ELY53919.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolytic
hypothetical protein
sw_6_scaffold_688_9
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8202..8516
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P159_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA63284.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
sw_6_scaffold_688_10
unknown

Not on your lists

8601..8762
DNA (162bp) protein (54aa)

This feature has no annotations

sw_6_scaffold_688_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8794..9438
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVR6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49418.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_6_scaffold_688_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9421..10017)
DNA (597bp) protein (199aa)
Translation factor SUA5 n=1 Tax=halophilic archaeon J07HX64 RepID=U1QNZ2_9EURY
Translation factor SUA5 {ECO:0000313|EMBL:ERH08803.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
DNA binding protein
sw_6_scaffold_688_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10022..10540)
DNA (519bp) protein (173aa)
Homolog to peroxiredoxin n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y1F5_NATM8
homolog to peroxiredoxin
Homolog to peroxiredoxin {ECO:0000313|EMBL:CCQ36310.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis
sw_6_scaffold_688_14
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10541..10834)
DNA (294bp) protein (98aa)
Glutaredoxin n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQE7_NATM8
grx2; glutaredoxin
Glutaredoxin {ECO:0000313|EMBL:CCQ36311.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strain DSM
sw_6_scaffold_688_15
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11383..12270)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z8I3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY82276.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
sw_6_scaffold_688_16
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12371..13480
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0I380_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ90397.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
hypothetical protein
sw_6_scaffold_688_17
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13553..14698
DNA (1146bp) protein (382aa)
Transporter permease n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D6D1_9EURY
Transporter permease {ECO:0000313|EMBL:ELZ30257.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1
transporter permease
sw_6_scaffold_688_18
Haloferax lucentense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14700..15581
DNA (882bp) protein (294aa)
ABC-type transport system ATP-binding protein (Probable substrate iron-III) n=2 Tax=Haloferax RepID=D4GS85_HALVD
putative iron-III ABC transporter ATP-binding protein
Putative iron-III ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ74943.1}; TaxID=1230452 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Ha
sw_6_scaffold_688_19
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15629..15859
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KI74_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA21042.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
hypothetical protein
sw_6_scaffold_688_20
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15907..17790
DNA (1884bp) protein (628aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
xenobiotic-transporting ATPase id=24614118 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Xenobiotic-transporting ATPase {ECO:0000313|EMBL:ESP89416.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus
sw_6_scaffold_688_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17852..18976
DNA (1125bp) protein (375aa)
trm1; N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC:2.1.1.32)
tRNA (guanine(26)-N(2))-dimethyltransferase {ECO:0000255|HAMAP-Rule:MF_00290}; EC=2.1.1.216 {ECO:0000255|HAMAP-Rule:MF_00290};; tRNA 2,2-dimethylguanosine-26 methyltransferase {ECO:0000255|HAMAP-Rule:
tRNA (guanine(26)-N(2))-dimethyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=TRM1_NATPD
sw_6_scaffold_688_22
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19041..20249
DNA (1209bp) protein (403aa)
UPF0761 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNU0_NATM8
UPF0761 family protein
UPF0761 family protein {ECO:0000313|EMBL:CCQ35651.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (s
sw_6_scaffold_688_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20246..20401
DNA (156bp) protein (52aa)
Phosphoesterase PA-phosphatase related protein {ECO:0000313|EMBL:EMA35824.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
Displaying 23 items

View Taxonomy