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sw_6_scaffold_413

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_413_1
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2..358
DNA (357bp) protein (119aa)
Putative transcriptional regulator, AsnC family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MK12_9EURY
Putative transcriptional regulator, AsnC family protein {ECO:0000313|EMBL:EMA46012.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sou
putative transcriptional regulator, AsnC family protein
sw_6_scaffold_413_2
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(366..1124)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D7Z5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ31586.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_6_scaffold_413_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1801..2370)
DNA (570bp) protein (190aa)
Methyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQ74_9EURY
Methyltransferase {ECO:0000313|EMBL:EMA47877.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 53
methyltransferase
sw_6_scaffold_413_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2370..3533)
DNA (1164bp) protein (388aa)
Mechanosensitive ion channel MscS n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MR92_9EURY
Mechanosensitive ion channel MscS {ECO:0000313|EMBL:EMA47878.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccha
mechanosensitive ion channel MscS
sw_6_scaffold_413_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3661..3846)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW64_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49054.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_6_scaffold_413_6
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3904..4782)
DNA (879bp) protein (293aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rul
dimethyladenosine transferase (EC:2.1.1.-)
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXB8_9EURY
sw_6_scaffold_413_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4862..5449)
DNA (588bp) protein (196aa)
RNA-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTY1_9EURY
RNA-binding protein {ECO:0000313|EMBL:EMA49056.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989
RNA-binding protein
sw_6_scaffold_413_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5489..5845)
DNA (357bp) protein (119aa)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:EMA49057.1}; EC=2.7.7.6 {ECO:0000313|EMBL:EMA49057.1};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
rpoF; DNA-directed RNA polymerase subunit F (EC:2.7.7.6)
DNA-directed RNA polymerase subunit F n=2 Tax=Halococcus RepID=M0MR97_9EURY
sw_6_scaffold_413_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(5842..6159)
DNA (318bp) protein (106aa)
50S ribosomal protein L21e n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MT09_9EURY
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
50S ribosomal protein L21e
sw_6_scaffold_413_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6215..6481)
DNA (267bp) protein (89aa)
Elongation factor 1-beta n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MTU2_9EURY
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=122745
ef1B; elongation factor 1-beta
sw_6_scaffold_413_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6484..6669)
DNA (186bp) protein (62aa)
Zn-ribbon RNA-binding protein n=2 Tax=Halococcus RepID=M0MQH5_9EURY
Zn-ribbon RNA-binding protein {ECO:0000313|EMBL:EMA49060.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
hypothetical protein
sw_6_scaffold_413_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6813..8039)
DNA (1227bp) protein (409aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MTY3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49061.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_6_scaffold_413_13
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8044..8958)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0N3U0_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA51370.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_6_scaffold_413_14
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9124..9894)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRA3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA47888.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_6_scaffold_413_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10299..10943
DNA (645bp) protein (215aa)
Bacterio-opsin activator HTH domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MW72_9EURY
Bacterio-opsin activator HTH domain-containing protein {ECO:0000313|EMBL:EMA49064.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sour
bacterio-opsin activator HTH domain-containing protein
sw_6_scaffold_413_16
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11649..11966
DNA (318bp) protein (106aa)
hlx5; HoxA-like transcriptional regulator id=24649732 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Response regulator receiver protein {ECO:0000313|EMBL:ERH10815.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
Displaying 16 items

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