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sw_7_scaffold_3218

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_3218_1
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2..331)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CT19_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ26366.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
hypothetical protein
sw_7_scaffold_3218_2
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(328..840)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5UX11_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV48192.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_7_scaffold_3218_3
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(878..1438)
DNA (561bp) protein (187aa)
Nudix family protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DDV3_9EURY
Nudix family protein {ECO:0000313|EMBL:ELZ33645.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM
nudix family protein
sw_7_scaffold_3218_4
unknown

Not on your lists

1557..1742
DNA (186bp) protein (62aa)

This feature has no annotations

sw_7_scaffold_3218_5
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1835..2131
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JF98_NATP1
Uncharacterized protein family (UPF0175)
Uncharacterized protein {ECO:0000313|EMBL:ELY70513.1}; Uncharacterized protein family (UPF0175) {ECO:0000313|EMBL:AGB29969.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales;
sw_7_scaffold_3218_6
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2124..2636
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NPG4_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV12719.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_7_scaffold_3218_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2633..3352)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LBP1_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA29859.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_7_scaffold_3218_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3488..4693
DNA (1206bp) protein (402aa)
Monooxygenase FAD-binding protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NHD1_9EURY
Monooxygenase FAD-binding protein {ECO:0000313|EMBL:EMA56040.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thaila
monooxygenase FAD-binding protein
sw_7_scaffold_3218_9
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4728..5252
DNA (525bp) protein (175aa)
Carboxymuconolactone decarboxylase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JKS6_NATP1
carboxymuconolactone decarboxylase family protein
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:ELY77794.1}; Carboxymuconolactone decarboxylase family protein {ECO:0000313|EMBL:AGB31859.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobac
sw_7_scaffold_3218_10
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5265..5627)
DNA (363bp) protein (121aa)
MazF family transcriptional regulator n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EW34_9EURY
MazF family transcriptional regulator {ECO:0000313|EMBL:ELZ51107.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum corien
MazF family transcriptional regulator
sw_7_scaffold_3218_11
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5624..5890)
DNA (267bp) protein (89aa)
AbrB family transcriptional regulator n=1 Tax=Haloferax alexandrinus JCM 10717 RepID=M0HTF8_9EURY
AbrB family transcriptional regulator {ECO:0000313|EMBL:ELZ87895.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandr
AbrB family transcriptional regulator
sw_7_scaffold_3218_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5998..6102)
DNA (105bp) protein (35aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EMA41096.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensi
acetyl-CoA acetyltransferase
sw_7_scaffold_3218_trna_1
unknown

Not on your lists

comp(6171..6243)
DNA (73bp)
transferRNA
sw_7_scaffold_3218_13
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6229..7926)
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JZE4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB38402.1}; Flags: Precursor;; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcu
sw_7_scaffold_3218_14
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7923..8504)
DNA (582bp) protein (194aa)
ABC-type transport system ATP-binding protein n=2 Tax=Halobacterium salinarum RepID=B0R6L2_HALS3
trp2; ABC transport protein
ABC transport protein {ECO:0000313|EMBL:AAG20087.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (str
Displaying 15 items

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