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sw_7_scaffold_274

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_274_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..591)
DNA (591bp) protein (197aa)
IS1341-type transposase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRT6_NATPD
IS1341-type transposase
IS1341-type transposase ISNph25 {ECO:0000313|EMBL:CAI49156.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas phara
sw_7_scaffold_274_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

779..2512
DNA (1734bp) protein (578aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptat
Pyruvate kinase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTI2_9EURY
pyruvate kinase
sw_7_scaffold_274_3
unknown

Not on your lists

2556..2888
DNA (333bp) protein (111aa)

This feature has no annotations

sw_7_scaffold_274_4
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2931..3482
DNA (552bp) protein (184aa)
Membrane protease regulatory membrane protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZJ26_9EURY
Membrane protease regulatory membrane protein {ECO:0000313|EMBL:EJN60700.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B
NfeD-like protein implicated in regulating membrane proteases
sw_7_scaffold_274_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4099..4695
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N087_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51286.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
stomatin family protein
sw_7_scaffold_274_6
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4789..5403
DNA (615bp) protein (205aa)
MarR family transcriptional regulator n=1 Tax=Halorubrum sp. T3 RepID=UPI00037652C5
Uncharacterized protein {ECO:0000313|EMBL:ELZ53646.1}; TaxID=1227468 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum distributum JCM 1011
hypothetical protein
sw_7_scaffold_274_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5492..5764)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CAA7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20231.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_7_scaffold_274_8
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5949..7757
DNA (1809bp) protein (603aa)
aglD; glycosyltransferase AglD (EC:2.4.1.-)
Glycosyltransferase AglD n=2 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=AGLD_HALVD
Glycosyltransferase AglD {ECO:0000313|EMBL:ELY26339.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC
sw_7_scaffold_274_9
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7905..8876
DNA (972bp) protein (324aa)
Transcription initiation factor IIB n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MIT8_9EURY
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natria
transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
sw_7_scaffold_274_10
unknown

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8928..9263
DNA (336bp) protein (112aa)

This feature has no annotations

sw_7_scaffold_274_11
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9264..10391)
DNA (1128bp) protein (376aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_01244}; Short=DHQ synthase {ECO:0000256|HAMAP-Rule:MF_01244};; EC=1.4.1.24 {ECO:0000256|HAMAP-Rule:MF_01244};; 3-dehydroquinate synthase II {ECO:00
3-dehydroquinate synthase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IDJ0_HALRX
putative alternative 3-dehydroquinate synthase
sw_7_scaffold_274_12
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10543..11007
DNA (465bp) protein (155aa)
Probable methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITI3_NATPD
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000313|EMBL:AKH97115.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" s
ogt; methylated-DNA--protein-cysteine methyltransferase
sw_7_scaffold_274_13
unknown

Not on your lists

comp(11004..11426)
DNA (423bp) protein (141aa)

This feature has no annotations

sw_7_scaffold_274_14
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11502..13613)
DNA (2112bp) protein (704aa)
lon; ATP-dependent protease Lon (EC:3.4.21.53)
ATP-dependent protease LA {ECO:0000313|EMBL:AAV46787.1}; EC=3.4.21.53 {ECO:0000313|EMBL:AAV46787.1};; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Hal
ATP-dependent protease LA n=3 Tax=Haloarcula RepID=Q5V116_HALMA
sw_7_scaffold_274_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13841..14392
DNA (552bp) protein (184aa)
nadM1_1; nicotinamide-nucleotide adenylyltransferase (EC:2.7.7.1)
Nicotinamide-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00243}; EC=2.7.7.1 {ECO:0000256|HAMAP-Rule:MF_00243};; NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00243}; NAD(+) pyrophosp
Nicotinamide-nucleotide adenylyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITI8_NATPD
sw_7_scaffold_274_16
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14568..16154)
DNA (1587bp) protein (529aa)
Chaperonin Cpn60/TCP-1 n=2 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SZX1_NATMM
chaperonin Cpn60/TCP-1
Chaperonin Cpn60/TCP-1 {ECO:0000313|EMBL:ADD06381.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 43099
sw_7_scaffold_274_17
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16210..17085
DNA (876bp) protein (292aa)
Predicted TIM-barrel fold metal-dependent hydrolase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRF4_HALBP
tim-barrel fold metal-dependent hydrolase
Predicted TIM-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:ADQ67995.1}; Tim-barrel fold metal-dependent hydrolase {ECO:0000313|EMBL:ELY24084.1}; TaxID=469382 species="Archaea; Euryarchaeota
sw_7_scaffold_274_18
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17089..17988)
DNA (900bp) protein (300aa)
Glycosyltransferases involved in cell wall biogenesis n=1 Tax=Halonotius sp. J07HN6 RepID=U1NUD1_9EURY
Glycosyltransferases involved in cell wall biogenesis {ECO:0000313|EMBL:ERH00929.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="H
glycosyl transferase family protein
sw_7_scaffold_274_19
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18099..18965)
DNA (867bp) protein (289aa)
Type 11 methyltransferase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LHW1_HALJP
Type 11 methyltransferase {ECO:0000313|EMBL:EMA33116.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6
SAM-dependent methyltransferase
sw_7_scaffold_274_20

Not on your lists

comp(19067..20251)
DNA (1185bp) protein (395aa)
phr2; deoxyribodipyrimidine photolyase (EC:4.1.99.3)
Deoxyribodipyrimidine photo-lyase family protein (Cryptochrome) n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZNZ4_9ARCH
Deoxyribodipyrimidine photo-lyase family protein (Cryptochrome) {ECO:0000313|EMBL:ESS04290.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
sw_7_scaffold_274_trna_1
unknown

Not on your lists

comp(20411..20485)
DNA (75bp)
transferRNA
sw_7_scaffold_274_21
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20533..21753)
DNA (1221bp) protein (407aa)
Membrane protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CCL1_9EURY
Membrane protein {ECO:0000313|EMBL:ELZ20980.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 13563.;"
hypothetical protein
sw_7_scaffold_274_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22042..22785)
DNA (744bp) protein (248aa)
Thymidylate synthase ThyX {ECO:0000256|HAMAP-Rule:MF_01408}; Short=TS {ECO:0000256|HAMAP-Rule:MF_01408};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_01408};; EC=2.1.1.148 {ECO:0000256|HAMAP-Rule:MF_01408}
thymidylate synthase ThyX n=1 Tax=Halococcus hamelinensis RepID=UPI000299E4B3
thymidylate synthase
sw_7_scaffold_274_23
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22877..23452
DNA (576bp) protein (192aa)
Beta-lactamase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L4F7_9EURY
Beta-lactamase {ECO:0000313|EMBL:EMA27968.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
beta-lactamase domain-containing protein
sw_7_scaffold_274_24
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23460..24284)
DNA (825bp) protein (275aa)
Conserved archaeal protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PIA6_9EURY
hypothetical protein
Conserved archaeal protein {ECO:0000313|EMBL:ERJ05211.1}; Uncharacterized protein {ECO:0000313|EMBL:CCQ34884.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
sw_7_scaffold_274_25
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24281..24631)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0P2T5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA64138.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
sw_7_scaffold_274_26
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24726..25331)
DNA (606bp) protein (202aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubr
manganese and iron superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EHC4_9EURY
sw_7_scaffold_274_27
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25392..25733
DNA (342bp) protein (114aa)
Aldehyde dehydrogenase n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XGZ2_9EURY
Aldehyde dehydrogenase {ECO:0000313|EMBL:ELY60681.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongol
aldehyde dehydrogenase
sw_7_scaffold_274_28
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25801..25986
DNA (186bp) protein (62aa)
Bacterio-opsin linked product n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KVQ3_HALAR
blp; bacterio-opsin linked product
Bacterio-opsin linked product {ECO:0000313|EMBL:EMA24299.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinen
Displaying 29 items

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