ggKbase home page

sw_7_scaffold_656

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_656_1
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..237
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L6A2_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA28653.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_7_scaffold_656_2
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(234..881)
DNA (648bp) protein (216aa)
Transcription regulator n=3 Tax=Haloarcula RepID=Q5UX78_HALMA
arsR; transcription regulator
ArsR family transcriptional regulator {ECO:0000313|EMBL:EMA12771.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sin
sw_7_scaffold_656_3
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(932..1657)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0K8A6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA17441.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
sw_7_scaffold_656_4
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1752..2378)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KJ48_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF26262.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_7_scaffold_656_5
unknown

Not on your lists

2559..2690
DNA (132bp) protein (44aa)
hypothetical protein
sw_7_scaffold_656_6
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2850..3746
DNA (897bp) protein (299aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HUZ4_HALHT
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEM56301.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
sw_7_scaffold_656_7
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3791..4801
DNA (1011bp) protein (337aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HUZ5_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHB65113.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica N601.;
sw_7_scaffold_656_8
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4798..5847
DNA (1050bp) protein (350aa)
Chloromuconate cycloisomerase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L504_HALJP
Chloromuconate cycloisomerase {ECO:0000313|EMBL:EMA28646.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica D
chloromuconate cycloisomerase rbh
sw_7_scaffold_656_9
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5879..6352)
DNA (474bp) protein (158aa)
Bacterioferritin comigrating protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0IVZ8_HALVA
Bacterioferritin comigrating protein {ECO:0000313|EMBL:EMA01007.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vall
bcp1; bacterioferritin comigrating protein
sw_7_scaffold_656_10
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6451..6972
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JJL5_HALVA
Uncharacterized protein {ECO:0000313|EMBL:EMA09332.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismortis ATCC
hypothetical protein
sw_7_scaffold_656_11
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7011..8855)
DNA (1845bp) protein (615aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HUZ8_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM56305.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
sw_7_scaffold_656_12
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8956..9468)
DNA (513bp) protein (171aa)
Anhydrase family 3 protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L692_HALJP
Anhydrase family 3 protein {ECO:0000313|EMBL:EMA28643.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM
anhydrase family 3 protein
sw_7_scaffold_656_13
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9510..11684)
DNA (2175bp) protein (725aa)
Transporter n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IMT3_9EURY
Transporter {ECO:0000313|EMBL:ELZ98111.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;"
cat4; transport protein (probable substrate cationic amino acids)
sw_7_scaffold_656_14
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11681..12142)
DNA (462bp) protein (154aa)
Trk potassium uptake system protein n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JE80_HALVA
Trk potassium uptake system protein {ECO:0000313|EMBL:EMA06653.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula valli
trkA5; Trk potassium uptake system protein
sw_7_scaffold_656_15
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12296..12784)
DNA (489bp) protein (163aa)
Transcription regulator Asn family n=3 Tax=Haloarcula RepID=Q5V1N6_HALMA
asnC3; Asn family transcriptional regulator
Asn family transcriptional regulator {ECO:0000313|EMBL:EMA32682.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula jap
sw_7_scaffold_656_16
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12861..14072)
DNA (1212bp) protein (404aa)
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; EC=1.1.1.34 {ECO:0000256|RuleBase:RU361219};; TaxID=1592728 s
3-hydroxy-3-methylglutaryl-CoA reductase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KH60_9EURY
3-hydroxy-3-methylglutaryl-CoA reductase
sw_7_scaffold_656_17
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14290..15411
DNA (1122bp) protein (374aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00569}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00569};; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
nadA; quinolinate synthetase (EC:2.5.1.72)
Quinolinate synthase A n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KK91_9EURY
sw_7_scaffold_656_18
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15408..17138
DNA (1731bp) protein (577aa)
nadB; L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L526_HALJP
L-aspartate oxidase {ECO:0000313|EMBL:EMA28687.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
sw_7_scaffold_656_19
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17353..19335)
DNA (1983bp) protein (661aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L548_HALJP
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HA
phosphoglyceromutase
sw_7_scaffold_656_20
unknown

Not on your lists

comp(19397..19468)
DNA (72bp) protein (24aa)

This feature has no annotations

Displaying 20 items

View Taxonomy