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sw_7_scaffold_278

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_278_1
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2..688
DNA (687bp) protein (229aa)
ATPase, type iv secretory pathway virb11 component like protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CSP8_9EURY
ATPase, type iv secretory pathway virb11 component like protein {ECO:0000313|EMBL:ELZ26290.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometric
type II secretion system protein E
sw_7_scaffold_278_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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685..2703
DNA (2019bp) protein (673aa)
Type II/IV secretion system transmembrane protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP51_NATPD
transmembrane protein (type II secretion system proteins TadC)
Type II/IV secretion system transmembrane protein {ECO:0000313|EMBL:CAI50101.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="
sw_7_scaffold_278_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2728..4347
DNA (1620bp) protein (540aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MRC4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46990.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
PKD domain-containing protein
sw_7_scaffold_278_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4416..6212)
DNA (1797bp) protein (599aa)
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=1132509 species="Archaea; Eurya
DNA polymerase II large subunit n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M9D1_9EURY
DNA polymerase D polymerase subunit DP2
sw_7_scaffold_278_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6235..8148)
DNA (1914bp) protein (638aa)
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=1227455 species="Archaea; Eurya
DNA polymerase II large subunit (EC:2.7.7.7)
DNA polymerase II large subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBQ1_9EURY
sw_7_scaffold_278_6
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8554..8721)
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M765_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40220.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_7_scaffold_278_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9041..10930
DNA (1890bp) protein (630aa)
putative dipeptides/oligopeptides ABC transporter periplasmic substrate-binding protein n=1 Tax=Halococcus hamelinensis RepID=UPI00029B574E
Putative dipeptides/oligopeptides ABC transporter periplasmic substrate-binding protein {ECO:0000313|EMBL:EMA40221.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
dppA1; putative dipeptides/oligopeptides ABC transporter periplasmic substrate-binding protein
sw_7_scaffold_278_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11150..12145
DNA (996bp) protein (332aa)
Putative dipeptides/oligopeptides ABC transporter permease n=2 Tax=Halococcus RepID=M0MF41_HALMO
Putative dipeptides/oligopeptides ABC transporter permease {ECO:0000313|EMBL:EMA53072.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
dppB1; putative dipeptides/oligopeptides ABC transporter permease
sw_7_scaffold_278_9
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12149..13636
DNA (1488bp) protein (496aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MG93_HALMO
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:EMA44368.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus
oppC1; oligopeptide ABC transporter permease
sw_7_scaffold_278_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13633..14841
DNA (1209bp) protein (403aa)
ABC-type transport system ATP-binding protein (Probable substrate dipeptides/oligopeptides) n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QP28_9EURY
ABC-type transport system ATP-binding protein (Probable substrate dipeptides/oligopeptides) {ECO:0000313|EMBL:EFW93681.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
oppD2; oligopeptide ABC transporter ATPase
sw_7_scaffold_278_11
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14838..16193
DNA (1356bp) protein (452aa)
Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAB2_9EURY
Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA42732.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococ
dppF1; putative dipeptides/oligopeptides ABC transporter ATP-binding protein
sw_7_scaffold_278_12
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16190..16696
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MF74_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA44371.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_7_scaffold_278_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16820..17347
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N582_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53067.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_7_scaffold_278_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17467..18348
DNA (882bp) protein (294aa)
putative inosine monophosphate dehydrogenase (EC:1.1.1.205)
Inosine monophosphate dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M355_9EURY
Inosine monophosphate dehydrogenase {ECO:0000313|EMBL:EMA40121.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hame
sw_7_scaffold_278_15
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


18504..20318
DNA (1815bp) protein (605aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycyl-tRNA ligase {ECO:0000313|EMBL:ELY33009.1}; EC=6.1.1.14 {ECO:0000313|EMBL:ELY33009.1};; Glycyl-tRNA synthetase {ECO:0000313|EMBL:ADJ13516.1}; EC=6.1.1.14 {ECO:0000313|EMBL:ADJ13516.1};; TaxID=79
Glycyl-tRNA ligase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4F4_HALJB
sw_7_scaffold_278_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20326..20922
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME97_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42740.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
dolichol kinase
sw_7_scaffold_278_17
unknown

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comp(20971..21210)
DNA (240bp) protein (80aa)

This feature has no annotations

sw_7_scaffold_278_18
unknown

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comp(21264..22151)
DNA (888bp) protein (296aa)

This feature has no annotations

sw_7_scaffold_278_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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22180..23349
DNA (1170bp) protein (390aa)
Aldo/keto reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CX55_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:ELZ26997.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
aldo/keto reductase
sw_7_scaffold_278_20
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23376..24401)
DNA (1026bp) protein (342aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000313|EMBL:ELZ33282.1}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000313|EMBL:ELZ33282.1};; SAI
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEW3_9EURY
phosphoribosylaminoimidazolesuccinocarboxamide synthase
sw_7_scaffold_278_21
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24504..25979
DNA (1476bp) protein (492aa)
FO synthase subunit 2 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N781_9EURY
FO synthase subunit 2 {ECO:0000313|EMBL:EMA52979.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM
FO synthase subunit 2
sw_7_scaffold_278_22
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(26342..27547)
DNA (1206bp) protein (402aa)
FO synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}; EC=2.5.1.77 {ECO:0000256|HAMAP-Rule:MF_01611};; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}
FO synthase subunit 1 n=1 Tax=Halobacterium sp. DL1 RepID=G4IEX3_9EURY
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofG subunit
sw_7_scaffold_278_23
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27870..28532)
DNA (663bp) protein (221aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=122745
2-phospho-L-lactate guanylyltransferase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N532_9EURY
2-phospho-L-lactate guanylyltransferase CofC
sw_7_scaffold_278_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28627..29514)
DNA (888bp) protein (296aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLX1_9EURY
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EMA46656.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
NAD-dependent epimerase/dehydratase
sw_7_scaffold_278_25
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29722..30315
DNA (594bp) protein (198aa)
tmk; thymidylate kinase (EC:2.7.4.9)
Probable thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=795797 species="Archaea; Euryarchaeot
Probable thymidylate kinase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9H0_HALJB
sw_7_scaffold_278_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30405..30722)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MLT8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46652.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_7_scaffold_278_27
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(30960..31190)
DNA (231bp) protein (77aa)
Transcriptional regulator n=1 Tax=Natronococcus occultus SP4 RepID=L0JW63_9EURY
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGB36319.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_7_scaffold_278_28
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31394..32089
DNA (696bp) protein (232aa)
TrkA-N domain-containing protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=L9VUK2_HALJB
TrkA-N domain-containing protein {ECO:0000313|EMBL:ELY40652.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccu
TrkA-N domain-containing protein
sw_7_scaffold_278_29
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

32091..32321
DNA (231bp) protein (77aa)
AsnC family transcriptional regulator n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J9I0_HALJB
AsnC family transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:ELY40653.1}; Transcriptional regulator, AsnC family protein {ECO:0000313|EMBL:ADJ14392.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobac
sw_7_scaffold_278_30
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(32408..33001)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQI3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ04870.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
Displaying items 1-30 of 47 in total

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