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sw_7_scaffold_48

Search features with annotation key words

Displaying items 1-30 of 116 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_48_1
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..929)
DNA (927bp) protein (309aa)
Poly(3-hydroxybutyrate) depolymerase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQJ1_9EURY
Poly(3-hydroxybutyrate) depolymerase {ECO:0000313|EMBL:EFW93255.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
putative esterase
sw_7_scaffold_48_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1136..1444
DNA (309bp) protein (103aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
gatC; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N603_9EURY
sw_7_scaffold_48_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1444..2904
DNA (1461bp) protein (487aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=122745
aatA; aspartyl-tRNA(Asn) amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNR2_9EURY
sw_7_scaffold_48_4
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2972..3682
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NH03_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA56389.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_7_scaffold_48_5
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3718..4077)
DNA (360bp) protein (120aa)
Transcription repressor CinR n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9WWX9_9EURY
Transcription repressor CinR {ECO:0000313|EMBL:ELY53706.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DS
hypothetical protein
sw_7_scaffold_48_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4446..6125)
DNA (1680bp) protein (560aa)
2-succinylbenzoate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_00731}; EC=6.2.1.26 {ECO:0000256|HAMAP-Rule:MF_00731};; o-succinylbenzoyl-CoA synthetase {ECO:0000256|HAMAP-Rule:MF_00731}; TaxID=1210908 spec
O-succinylbenzoate-CoA ligase n=1 Tax=Halogranum salarium B-1 RepID=J3JHV6_9EURY
o-succinylbenzoate--CoA ligase
sw_7_scaffold_48_7
unknown

Not on your lists

6377..6871
DNA (495bp) protein (165aa)

This feature has no annotations

sw_7_scaffold_48_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6897..8006)
DNA (1110bp) protein (370aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_00470}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_00470};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_00470};; EC=4.2.1.113 {ECO:0000256|HAMAP-Rul
Chloromuconate cycloisomerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP03_9EURY
chloromuconate cycloisomerase
sw_7_scaffold_48_9
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8012..8950)
DNA (939bp) protein (313aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};;
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MJN7_HALMO
1,4-dihydroxy-2-naphthoate octaprenyltransferase
sw_7_scaffold_48_10
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9062..9319)
DNA (258bp) protein (86aa)
3-oxoacyl-[acyl-carrier protein] reductase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DJ59_9EURY
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:ELZ35511.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum t
atsC; 3-oxoacyl-ACP reductase
sw_7_scaffold_48_11
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9728..10339)
DNA (612bp) protein (204aa)
Isopentenyl-diphosphate Delta-isomerase {ECO:0000256|HAMAP-Rule:MF_00202}; Short=IPP isomerase {ECO:0000256|HAMAP-Rule:MF_00202};; EC=5.3.3.2 {ECO:0000256|HAMAP-Rule:MF_00202};; IPP:DMAPP isomerase {E
isopentenyl-diphosphate delta-isomerase (EC:5.3.3.2)
Isopentenyl-diphosphate Delta-isomerase n=1 Tax=Halogranum salarium B-1 RepID=J3EWP3_9EURY
sw_7_scaffold_48_12
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10455..11426
DNA (972bp) protein (324aa)
Caax amino terminal protease n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N3Q9_9EURY
Caax amino terminal protease {ECO:0000313|EMBL:EMA51754.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandens
caax amino terminal protease
sw_7_scaffold_48_13
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11469..11882)
DNA (414bp) protein (138aa)
Transcriptional regulator n=1 Tax=Natronococcus occultus SP4 RepID=L0JUC8_9EURY
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGB36632.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_7_scaffold_48_14
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11996..12265
DNA (270bp) protein (90aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209, ECO:0000313|EMBL:ELZ46741.1};; Carbamoyl-phosphate synthetase glutamine chain {
Carbamoyl-phosphate synthase small chain n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EG31_9EURY
carbamoyl phosphate synthase
sw_7_scaffold_48_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12281..13060
DNA (780bp) protein (260aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
carA; carbamoyl-phosphate synthase (glutamine-hydrolyzing) small subunit (EC:6.3.5.5)
Carbamoyl-phosphate synthase small chain n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXK0_9EURY
sw_7_scaffold_48_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13191..13841
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N359_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51968.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
putative DNA binding protein
sw_7_scaffold_48_17
unknown

Not on your lists

comp(13881..14456)
DNA (576bp) protein (192aa)

This feature has no annotations

sw_7_scaffold_48_18
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15019..15555
DNA (537bp) protein (179aa)
UspA domain protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KDV4_HALAR
UspA domain protein {ECO:0000313|EMBL:EMA17995.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 12
UspA domain-containing protein
sw_7_scaffold_48_19
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15577..15999
DNA (423bp) protein (141aa)
Amino acid permease-associated region n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F5J5_9EURY
Amino acid permease-associated region {ECO:0000313|EMBL:ELZ54583.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochst
amino acid permease-associated region
sw_7_scaffold_48_20

Not on your lists

15975..16847
DNA (873bp) protein (291aa)
Amino acid permease-associated region n=1 Tax=halophilic archaeon DL31 RepID=G2MGZ4_9ARCH
amino acid permease-associated protein
Amino acid permease-associated region {ECO:0000313|EMBL:AEN06084.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_7_scaffold_48_21
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16983..17792
DNA (810bp) protein (270aa)
Amino acid permease-associated region n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZR8_9EURY
Amino acid permease-associated region {ECO:0000313|EMBL:EFW89812.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
amino acid transporter
sw_7_scaffold_48_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17948..18535)
DNA (588bp) protein (196aa)
Cationic amino acid transporter n=2 Tax=Halococcus hamelinensis RepID=M0LWT9_9EURY
Cationic amino acid transporter {ECO:0000313|EMBL:EMA37936.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameline
cat3; cationic amino acid transporter
sw_7_scaffold_48_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19087..19842
DNA (756bp) protein (252aa)
Transcription regulator n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUR7_9EURY
Transcription regulator {ECO:0000313|EMBL:EMA37196.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
transcription regulator
sw_7_scaffold_48_24
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20056..22440
DNA (2385bp) protein (795aa)
Amino acid permease-associated region n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RQY9_HALTV
amino acid permease
Amino acid permease-associated region {ECO:0000313|EMBL:ADB60470.1}; Flags: Precursor;; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source
sw_7_scaffold_48_25
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22468..25002)
DNA (2535bp) protein (845aa)
DNA mismatch repair protein MutL n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SMS1_9EURY
DNA mismatch repair protein MutL {ECO:0000256|HAMAP-Rule:MF_00149}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisals
DNA mismatch repair protein MutL
sw_7_scaffold_48_26
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24999..27785)
DNA (2787bp) protein (929aa)
DNA mismatch repair protein MutS n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FDM0_9EURY
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000313|EMBL:ELZ58020.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.
DNA mismatch repair protein MutS
sw_7_scaffold_48_27
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27982..28302
DNA (321bp) protein (107aa)
Ferredoxin n=1 Tax=Natronococcus occultus SP4 RepID=L0JY77_9EURY
ferredoxin
Ferredoxin {ECO:0000313|EMBL:AGB36783.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_7_scaffold_48_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28464..29864)
DNA (1401bp) protein (467aa)
Phosphomethylpyrimidine kinase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX29_9EURY
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EMA49878.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
phosphomethylpyrimidine kinase
sw_7_scaffold_48_29
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29861..30934)
DNA (1074bp) protein (358aa)
AIR synthase related protein domain protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDC5_9EURY
AIR synthase related protein domain protein {ECO:0000313|EMBL:EMA43348.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococ
AIR synthase related protein domain protein
sw_7_scaffold_48_30
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31007..32599)
DNA (1593bp) protein (531aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
Serine--tRNA ligase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CL60_9EURY
seryl-tRNA synthetase
Displaying items 1-30 of 116 in total

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