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sw_7_scaffold_563

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_563_16S_1
unknown

Not on your lists

comp(2..537)
DNA (536bp)
sw_7_scaffold_563_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1172..1483)
DNA (312bp) protein (104aa)
Non-histone chromosomal MC1 family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7E4_9EURY
Non-histone chromosomal MC1 family protein {ECO:0000313|EMBL:EMA53029.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
nonhistone chromosomal protein
sw_7_scaffold_563_2
unknown

Not on your lists

comp(1630..1959)
DNA (330bp) protein (110aa)

This feature has no annotations

sw_7_scaffold_563_3
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2098..3159
DNA (1062bp) protein (354aa)
Dihydroorotate dehydrogenase 2 {ECO:0000313|EMBL:ELZ38059.1}; EC=1.3.98.1 {ECO:0000313|EMBL:ELZ38059.1};; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Ha
pyrD; dihydroorotate dehydrogenase (quinone) (EC:1.3.5.2)
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DVE1_9EURY
sw_7_scaffold_563_4
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3321..4469
DNA (1149bp) protein (383aa)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369, ECO:0000313|EMBL:ELZ29817.1}; EC=2.3.3.16 {ECO:0000256|PIRNR:PIRNR001369};; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales;
citrate synthase (EC:2.3.3.1)
Citrate synthase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D545_9EURY
sw_7_scaffold_563_5
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4605..5000)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MHN6_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA43930.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_7_scaffold_563_trna_1
unknown

Not on your lists

comp(6196..6276)
DNA (81bp)
transferRNA
sw_7_scaffold_563_6
unknown

Not on your lists

comp(6336..6491)
DNA (156bp) protein (52aa)

This feature has no annotations

sw_7_scaffold_563_7
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6555..6959)
DNA (405bp) protein (135aa)
Endoribonuclease L-PSP n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X4Q9_9EURY
Endoribonuclease L-PSP {ECO:0000313|EMBL:ELY56774.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
endoribonuclease L-PSP
sw_7_scaffold_563_8
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7099..8307)
DNA (1209bp) protein (403aa)
ilvA, tdcB; threonine ammonia-lyase (EC:4.3.1.19)
threonine dehydratase n=1 Tax=Halococcus hamelinensis RepID=UPI000299F9E5
Threonine dehydratase {ECO:0000313|EMBL:EMA45869.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DS
sw_7_scaffold_563_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8566..8982)
DNA (417bp) protein (139aa)
AIG2 family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MN44_9EURY
AIG2 family protein {ECO:0000313|EMBL:EMA45870.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM
aig2-like family protein
sw_7_scaffold_563_10
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9281..10948
DNA (1668bp) protein (556aa)
Thermosome n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RYS4_HALTV
thermosome subunit
Thermosome {ECO:0000313|EMBL:ADB61892.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strain ATCC 51198
sw_7_scaffold_563_11
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11060..11989)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N4A5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52777.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_7_scaffold_563_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12037..12969)
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY06_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49305.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_7_scaffold_563_13
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13079..13873)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NG58_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA55680.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_7_scaffold_563_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14039..15034
DNA (996bp) protein (332aa)
Alanine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00935}; Short=AlaDH {ECO:0000256|HAMAP-Rule:MF_00935};; EC=1.4.1.1 {ECO:0000256|HAMAP-Rule:MF_00935};; TaxID=1132509 species="Archaea; Euryarchaeota; H
l-alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M2V0_9EURY
sw_7_scaffold_563_15
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(15355..18363)
DNA (3009bp) protein (1003aa)
leucyl-tRNA synthetase (EC:6.1.1.9)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049, ECO:0000313|EMBL:ELZ58188.1};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1227
Leucine--tRNA ligase n=3 Tax=Haloferax RepID=M0FFS4_9EURY
sw_7_scaffold_563_16
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18572..18973)
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JIS2_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB30231.1}; Flags: Precursor;; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellir
sw_7_scaffold_563_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19108..19572
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M370_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40141.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_7_scaffold_563_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19605..20048)
DNA (444bp) protein (148aa)
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC62_9EURY
Alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:EMA55532.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; H
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
sw_7_scaffold_563_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20163..20603)
DNA (441bp) protein (147aa)
Hsp20-type chaperone n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M406_9EURY
Hsp20-type chaperone {ECO:0000313|EMBL:EMA40143.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.
molecular chaperone
sw_7_scaffold_563_20
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20729..21535)
DNA (807bp) protein (269aa)
pheA2; prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase {ECO:0000313|EMBL:AFK18150.1}; EC=4.2.1.51 {ECO:0000313|EMBL:AFK18150.1};; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;
Prephenate dehydratase n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R1P0_HALMT
sw_7_scaffold_563_21
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21607..22047)
DNA (441bp) protein (147aa)
Acyl-CoA thioester hydrolase, YbgC/YbaW family n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JNF4_NATP1
acyl-CoA thioester hydrolase, YbgC/YbaW family
Acyl-CoA thioester hydrolase, YbgC/YbaW family {ECO:0000313|EMBL:AGB32779.1}; Thioesterase superfamily protein {ECO:0000313|EMBL:ELY75783.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria
sw_7_scaffold_563_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22204..23061)
DNA (858bp) protein (286aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCS5_9EURY
Displaying 24 items

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