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sw_7_scaffold_1086

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_1086_1
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1..255)
DNA (255bp) protein (85aa)
50S ribosomal protein L12 n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NHP0_9EURY
50S ribosomal protein L12 {ECO:0000256|HAMAP-Rule:MF_01478}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DS
rpl12p; 50S ribosomal protein L12P
sw_7_scaffold_1086_2
unknown

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503..802
DNA (300bp) protein (100aa)

This feature has no annotations

sw_7_scaffold_1086_3
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1194..2075
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3STY3_NATMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD07072.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 4309
sw_7_scaffold_1086_4
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2063..2329
DNA (267bp) protein (89aa)
Elongation factor 1-beta n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZL3_HALMD
translation elongation factor aEF-1 beta
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=485914
sw_7_scaffold_1086_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2388..3608)
DNA (1221bp) protein (407aa)
cystathionine gamma-lyase (EC:4.4.1.1)
Cystathionine alpha synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFF8_9EURY
Cystathionine alpha synthase {ECO:0000313|EMBL:EMA44088.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
sw_7_scaffold_1086_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3756..4850)
DNA (1095bp) protein (365aa)
Tyrosine--tRNA ligase {ECO:0000256|SAAS:SAAS00011232}; EC=6.1.1.1 {ECO:0000256|SAAS:SAAS00011232};; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
Tyrosyl-tRNA ligase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MSG3_9EURY
tyrosyl-tRNA synthetase
sw_7_scaffold_1086_7

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4911..5681
DNA (771bp) protein (257aa)
birA; biotin--[acetyl-CoA-carboxylase] ligase (EC:6.3.4.15)
BirA, biotin-[acetyl-CoA-carboxylase] ligase region n=1 Tax=uncultured archaeon A07HB70 RepID=V4XDP3_9ARCH
BirA, biotin-[acetyl-CoA-carboxylase] ligase region {ECO:0000313|EMBL:ESS06119.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_7_scaffold_1086_8
unknown

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comp(5813..6232)
DNA (420bp) protein (140aa)

This feature has no annotations

sw_7_scaffold_1086_9
unknown

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6508..6996
DNA (489bp) protein (163aa)

This feature has no annotations

sw_7_scaffold_1086_10
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7003..8250)
DNA (1248bp) protein (416aa)
Metal-dependent phosphohydrolase HD sub domain protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CG65_9EURY
Metal-dependent phosphohydrolase HD sub domain protein {ECO:0000313|EMBL:ELZ20874.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source=
HD superfamily phosphohydrolase
sw_7_scaffold_1086_11
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(8581..9084)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4WA84_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN02509.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
Displaying 11 items

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