ggKbase home page

sw_7_scaffold_266

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_266_trna_1
unknown

Not on your lists

28..99
DNA (72bp)
transferRNA
sw_7_scaffold_266_1
unknown

Not on your lists

215..586
DNA (372bp) protein (124aa)

This feature has no annotations

sw_7_scaffold_266_2
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(550..1227)
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CE17_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20893.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
sw_7_scaffold_266_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1393..2337)
DNA (945bp) protein (315aa)
Acetyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXT4_9EURY
Acetyltransferase {ECO:0000313|EMBL:EMA50123.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;
N-acetyltransferase GCN5
sw_7_scaffold_266_4
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2350..3135)
DNA (786bp) protein (262aa)
Alanyl-tRNA synthetase, class IIc-like protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W094_9EURY
Alanyl-tRNA synthetase, class IIc-like protein
Alanyl-tRNA synthetase, class IIc-like protein {ECO:0000313|EMBL:AGN01906.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinar
sw_7_scaffold_266_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3238..3966
DNA (729bp) protein (243aa)
HD family hydrolase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISH7_NATPD
hypothetical protein
HD family hydrolase {ECO:0000313|EMBL:CAI48909.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_7_scaffold_266_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4344..5903
DNA (1560bp) protein (520aa)
Polysaccharide biosynthesis protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI10_9EURY
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EMA45362.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
membrane protein involved in the export of O-antigen and teichoic acid
sw_7_scaffold_266_7
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5928..7121)
DNA (1194bp) protein (398aa)
ATP-grasp protein-like protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XBE3_9EURY
ATP-grasp protein-like protein {ECO:0000313|EMBL:ELY58962.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius inn
ATP-grasp protein-like protein
sw_7_scaffold_266_8
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7253..8419)
DNA (1167bp) protein (389aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BZM4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ15124.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
sw_7_scaffold_266_9
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8468..9400)
DNA (933bp) protein (311aa)
Polysaccharide deacetylase n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C2G6_9EURY
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AHG02335.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-
sw_7_scaffold_266_10
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9605..10606
DNA (1002bp) protein (334aa)
Glycosyltransferase-like protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QQ60_9EURY
Glycosyltransferase-like protein {ECO:0000313|EMBL:EFW93124.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pauc
group 1 glycosyl transferase
sw_7_scaffold_266_11
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10700..12310
DNA (1611bp) protein (537aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JKV6_NATP1
hypothetical protein
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:ELY81852.1}; Uncharacterized protein {ECO:0000313|EMBL:AGB31212.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Na
sw_7_scaffold_266_12
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12488..12913)
DNA (426bp) protein (142aa)
Molecular chaperone n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRG5_HALBP
molecular chaperone
Molecular chaperone {ECO:0000313|EMBL:ELY24073.1}; Molecular chaperone (Small heat shock protein) {ECO:0000313|EMBL:ADQ68006.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacal
sw_7_scaffold_266_13
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12910..13068)
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8H1_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ16217.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_7_scaffold_266_14
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13136..13993
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3EYZ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60662.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_7_scaffold_266_15
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14106..15830
DNA (1725bp) protein (575aa)
Radical SAM protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DPM0_9EURY
Radical SAM protein {ECO:0000313|EMBL:ELZ37420.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 1137.;
radical SAM protein
sw_7_scaffold_266_16
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16387..17685
DNA (1299bp) protein (433aa)
Sugar phosphate permease n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MNT4_HALMO
Sugar phosphate permease {ECO:0000313|EMBL:EMA47326.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 130
sugar transporter
sw_7_scaffold_266_17
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17809..18228)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M6B4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41241.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
conserved hypothetical membrane protein (DUF3054)
sw_7_scaffold_266_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18336..18938
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5X3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53281.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_7_scaffold_266_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19059..20036
DNA (978bp) protein (326aa)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
Flap endonuclease 1 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHD8_9EURY
flap endonuclease-1
sw_7_scaffold_266_20
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20370..20621
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRT3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92702.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_7_scaffold_266_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20822..21565
DNA (744bp) protein (248aa)
Oxidoreductase-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9J7_9EURY
Oxidoreductase-like protein {ECO:0000313|EMBL:EMA54253.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
short-chain dehydrogenase/reductase SDR
sw_7_scaffold_266_22
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21727..21999
DNA (273bp) protein (91aa)
Iron sulfur domain-containing, CDGSH-type n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QR26_9EURY
Iron sulfur domain-containing, CDGSH-type {ECO:0000313|EMBL:EFW92934.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladapt
Iron sulfur-containing domain, CDGSH-type
sw_7_scaffold_266_23
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22139..24130
DNA (1992bp) protein (664aa)
Putative DNA helicase Rad25 {ECO:0000256|HAMAP-Rule:MF_01489}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01489};; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacacea
DNA/RNA helicase, superfamily ii n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DJR6_9EURY
DNA/RNA helicase, superfamily ii
sw_7_scaffold_266_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24388..24510
DNA (123bp) protein (41aa)
Small CPxCG-related zinc finger protein {ECO:0000313|EMBL:CCI69583.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomon
sw_7_scaffold_266_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24817..26082
DNA (1266bp) protein (422aa)
AMP-dependent synthetase and ligase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUX7_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EMA36179.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hame
acyl-CoA synthetase/AMP-acid ligase
sw_7_scaffold_266_26
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26094..26480
DNA (387bp) protein (129aa)
Acyl-CoA synthetase/AMP-acid ligase n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C1D4_9EURY
Acyl-CoA synthetase/AMP-acid ligase {ECO:0000313|EMBL:ELZ17071.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena ther
hypothetical protein
sw_7_scaffold_266_27
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26629..27996
DNA (1368bp) protein (456aa)
Extracellular ligand-binding receptor n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JJ63_9EURY
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EMA07994.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrifi
abc08s; branched-chain/neutral amino acids amide ABC transporter periplasmic substrate-binding protein 4
sw_7_scaffold_266_28
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28003..28926
DNA (924bp) protein (308aa)
Branched-chain/neutral amino acids ABC transporter permease I n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JI23_9EURY
Branched-chain/neutral amino acids ABC transporter permease I {ECO:0000313|EMBL:EMA07993.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" sou
abc08p1; branched-chain/neutral amino acids ABC transporter permease I
sw_7_scaffold_266_29
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28923..29963
DNA (1041bp) protein (347aa)
Branched-chain/neutral amino acids ABC transporter permease n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JFW9_9EURY
Branched-chain/neutral amino acids ABC transporter permease {ECO:0000313|EMBL:EMA07992.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" sourc
abc08p2; branched-chain/neutral amino acids ABC transporter permease
Displaying items 1-30 of 50 in total

View Taxonomy