ggKbase home page

sw_7_scaffold_230

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_230_1
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(48..416)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VZN3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY41508.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;
hypothetical protein
sw_7_scaffold_230_2
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

751..1059
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9XC99_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY59036.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
hypothetical protein
sw_7_scaffold_230_3
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1135..1401
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JW75_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB36334.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_7_scaffold_230_4
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1660..2856
DNA (1197bp) protein (399aa)
Uncharacterized protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SRF8_NATMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADD04663.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 4309
sw_7_scaffold_230_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3239..4483
DNA (1245bp) protein (415aa)
odc; ornithine decarboxylase (EC:4.1.1.17 4.1.1.20)
Diaminopimelate decarboxylase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK15_9EURY
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
sw_7_scaffold_230_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4660..5442
DNA (783bp) protein (261aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=485914 spec
5'-nucleotidase SurE n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NY07_HALMD
stationary-phase survival protein SurE
sw_7_scaffold_230_7
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5492..5830)
DNA (339bp) protein (113aa)
Chorismate mutase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HD96_9EURY
Chorismate mutase {ECO:0000313|EMBL:ESP88690.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum ty
chorismate mutase
sw_7_scaffold_230_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5823..6677)
DNA (855bp) protein (285aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00370}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00370};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00370};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacte
shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CM25_9EURY
sw_7_scaffold_230_9
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6890..7441
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Natrinema altunense JCM 12890 RepID=M0A0A3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY91267.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
hypothetical protein
sw_7_scaffold_230_10
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7499..7927
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NT76_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV13187.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_7_scaffold_230_11
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8060..8194)
DNA (135bp) protein (45aa)
Uncharacterized protein n=7 Tax=Haloarcula RepID=V5TMF0_HALHI
hypothetical protein
Putative C2H2 zinc finger DNA-binding protein {ECO:0000313|EMBL:EMA12029.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloar
sw_7_scaffold_230_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8534..10660
DNA (2127bp) protein (709aa)
Vesicle-fusing ATPase (EC:3.6.4.6)
AAA family ATPase, CDC48 subfamily n=1 Tax=halophilic archaeon J07HX64 RepID=U1QNM0_9EURY
AAA family ATPase, CDC48 subfamily {ECO:0000313|EMBL:ERH08658.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_7_scaffold_230_13
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10764..11714)
DNA (951bp) protein (317aa)
Aspartic acid-rich protein {ECO:0000313|EMBL:ELY61927.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermo
sw_7_scaffold_230_14
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12374..13183)
DNA (810bp) protein (270aa)
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NXL9_HALMD
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase {ECO:0000313|EMBL:ACV48453.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicro
sw_7_scaffold_230_15
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13180..13611)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRS5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36282.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_7_scaffold_230_16
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13644..13868)
DNA (225bp) protein (75aa)
hypothetical protein id=24654159 bin=uncultured_archaeon_J07HX5 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultured_archaeon_J07HX5
Uncharacterized protein {ECO:0000313|EMBL:ERG88465.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
hypothetical protein
sw_7_scaffold_230_17
unknown

Not on your lists

comp(14040..14258)
DNA (219bp) protein (73aa)

This feature has no annotations

sw_7_scaffold_230_18
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14364..15398)
DNA (1035bp) protein (345aa)
Regulatory protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KXT1_HALAR
phoU_5; transport system regulatory protein ( substrate phosphate)
Regulatory protein {ECO:0000313|EMBL:EMA24565.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 122
sw_7_scaffold_230_19
unknown

Not on your lists

15719..15871
DNA (153bp) protein (51aa)

This feature has no annotations

sw_7_scaffold_230_20
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16186..16800
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J5T4_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ13740.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_7_scaffold_230_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17015..17557
DNA (543bp) protein (181aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000255|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000255|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000255|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000255|HAMAP-Rul
Orotate phosphoribosyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PYRE_NATPD
Displaying 21 items

View Taxonomy