ggKbase home page

sw_7_scaffold_512

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_7_scaffold_512_1
unknown

Not on your lists

3..200
DNA (198bp) protein (66aa)

This feature has no annotations

sw_7_scaffold_512_2

Not on your lists

250..708
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XXP0_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS03327.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
hypothetical protein
sw_7_scaffold_512_3

Not on your lists

868..1476
DNA (609bp) protein (203aa)
Putative DNA binding protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y9U6_9ARCH
Putative DNA binding protein {ECO:0000313|EMBL:ESS09616.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
Bacterio-opsin activator HTH domain-containing protein
sw_7_scaffold_512_4
unknown

Not on your lists

2129..2446
DNA (318bp) protein (106aa)

This feature has no annotations

sw_7_scaffold_512_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2447..4105)
DNA (1659bp) protein (553aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1085028 species="Archaea; Euryarcha
Lysine--tRNA ligase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PLE6_9EURY
lysyl-tRNA synthetase
sw_7_scaffold_512_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4102..4788)
DNA (687bp) protein (229aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00055191}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00055
uridylate kinase n=1 Tax=Halomicrobium katesii RepID=UPI000366759F
pyrH; uridylate kinase
sw_7_scaffold_512_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5157..5399
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6D335_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ33810.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_7_scaffold_512_8
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5573..6721
DNA (1149bp) protein (383aa)
Peptidase M50 n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2U5_HALMD
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:ACV47417.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strain AT
sw_7_scaffold_512_9
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6850..7716)
DNA (867bp) protein (289aa)
thiamine-monophosphate kinase (EC:2.7.4.16) rbh
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
Thiamine-monophosphate kinase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NT72_HALUD
sw_7_scaffold_512_10
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


7861..8322
DNA (462bp) protein (154aa)
30S ribosomal protein S19e n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L5R0_HALJP
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica
rps19E; 30S ribosomal protein S19
sw_7_scaffold_512_11
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8515..10662
DNA (2148bp) protein (716aa)
Serine/threonine protein kinase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NTN2_HALUD
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ACV12222.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahens
sw_7_scaffold_512_12
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10738..11139)
DNA (402bp) protein (134aa)
Phenylacetic acid degradation protein PaaI n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J819_HALVA
paaI; phenylacetic acid degradation protein PaaI
Phenylacetic acid degradation protein PaaI {ECO:0000313|EMBL:EMA05106.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcul
sw_7_scaffold_512_13
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11853..12956
DNA (1104bp) protein (368aa)
Peptidase M48 Ste24p n=1 Tax=Natrinema altunense JCM 12890 RepID=M0A1F0_9EURY
Peptidase M48 Ste24p {ECO:0000313|EMBL:ELY91667.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
peptidase M48 Ste24p
sw_7_scaffold_512_14
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12953..14638
DNA (1686bp) protein (562aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9YEN3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY71408.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
sw_7_scaffold_512_15
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14635..15312
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZYT4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY91665.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
hypothetical protein
sw_7_scaffold_512_16
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15309..16850
DNA (1542bp) protein (514aa)
Uncharacterized protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0B7G7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ06218.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990
hypothetical protein
sw_7_scaffold_512_17
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16850..18241
DNA (1392bp) protein (464aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LYZ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA37340.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
sw_7_scaffold_512_18
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18263..19228)
DNA (966bp) protein (322aa)
ATPase n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3T0N0_NATMM
ATPase rbh
ATPase {ECO:0000313|EMBL:ELY32029.1}; ATPase associated with various cellular activities AAA_3 {ECO:0000313|EMBL:ADD06509.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales;
sw_7_scaffold_512_19
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19347..19826
DNA (480bp) protein (160aa)
DUF456 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNF5_NATM8
DUF456 family protein
DUF456 family protein {ECO:0000313|EMBL:CCQ35456.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
sw_7_scaffold_512_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19975..20352
DNA (378bp) protein (126aa)
Endoribonuclease L-PSP n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0I4_HALMD
endoribonuclease L-PSP
Endoribonuclease L-PSP {ECO:0000313|EMBL:ACV46966.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomic
sw_7_scaffold_512_21
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20362..20568
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU08_NATPD
psp operon protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48375.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_7_scaffold_512_trna_1
unknown

Not on your lists

20598..20678
DNA (81bp)
transferRNA
sw_7_scaffold_512_22
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20815..21447)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PJ77_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA70082.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
sw_7_scaffold_512_23
unknown

Not on your lists

comp(21444..21776)
DNA (333bp) protein (111aa)

This feature has no annotations

sw_7_scaffold_512_24
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21769..22008)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AD73_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY96700.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990
hypothetical protein
sw_7_scaffold_512_25

Not on your lists

22150..22671
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Environmental Halophage eHP-14 RepID=H9YQR9_9VIRU
Uncharacterized protein {ECO:0000313|EMBL:AFH22009.1}; TaxID=1168816 species="Viruses; unclassified phages; environmental samples.;" source="Environmental Halophage eHP-14.;"
hypothetical protein
sw_7_scaffold_512_26
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22809..23093
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9ZCQ0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY84255.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
sw_7_scaffold_512_27
unknown

Not on your lists

23404..23685
DNA (282bp) protein (94aa)

This feature has no annotations

sw_7_scaffold_512_28
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24043..24585)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RP99_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB60133.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strai
sw_7_scaffold_512_29
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24778..25818
DNA (1041bp) protein (347aa)
PAS sensor histidine kinase n=2 Tax=Halonotius RepID=U1NWD8_9EURY
PAS sensor histidine kinase {ECO:0000313|EMBL:ERH02066.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
GAF sensor signal transduction histidine kinase
Displaying items 1-30 of 33 in total

View Taxonomy