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sw_8_scaffold_186

Search features with annotation key words

Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_8_scaffold_186_1
unknown

Not on your lists

comp(2..172)
DNA (171bp) protein (57aa)

This feature has no annotations

sw_8_scaffold_186_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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238..657
DNA (420bp) protein (140aa)
Iron-sulfur cluster assembly protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITH2_NATPD
nitrogen fixation protein NifU
Iron-sulfur cluster assembly protein {ECO:0000313|EMBL:CAI48561.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
sw_8_scaffold_186_3
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

743..1630
DNA (888bp) protein (296aa)
2-dehydropantoate 2-reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriac
2-dehydropantoate 2-reductase n=1 Tax=Halomicrobium katesii RepID=UPI00035C4F6F
sw_8_scaffold_186_4
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1691..1984
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9WGM6_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY47483.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens J
sw_8_scaffold_186_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2271..3605
DNA (1335bp) protein (445aa)
Homolog to ribonuclease R n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITK5_NATPD
ribonuclease R-like protein
Homolog to ribonuclease R {ECO:0000313|EMBL:CAI48528.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (
sw_8_scaffold_186_6
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3672..5234
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NPB0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKF39737.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
hypothetical protein
sw_8_scaffold_186_7

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comp(5300..6520)
DNA (1221bp) protein (407aa)
ABC-type branched-chain amino acid transport system, permease component n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y8C7_9ARCH
ABC-type branched-chain amino acid transport system, permease component {ECO:0000313|EMBL:ESS11178.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
inner-membrane translocator
sw_8_scaffold_186_8

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comp(6521..7879)
DNA (1359bp) protein (453aa)
ABC-type branched-chain amino acid transport system, periplasmic component n=1 Tax=uncultured archaeon A07HR60 RepID=V4YIM2_9ARCH
ABC-type branched-chain amino acid transport system, periplasmic component {ECO:0000313|EMBL:ESS11177.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;
extracellular ligand-binding receptor
sw_8_scaffold_186_9
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7990..8919
DNA (930bp) protein (310aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein id=24635988 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ERH03666.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halor
inner-membrane translocator
sw_8_scaffold_186_10
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8916..9758
DNA (843bp) protein (281aa)
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein id=24635987 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ERH03665.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorub
ABC transporter
sw_8_scaffold_186_11
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9755..10474
DNA (720bp) protein (240aa)
ABC transporter; K01996 branched-chain amino acid transport system ATP-binding protein id=24635986 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ERH03664.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorub
ABC transporter
sw_8_scaffold_186_12

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10525..12081
DNA (1557bp) protein (519aa)
Acyl-coenzyme A synthetase/AMP-(Fatty) acid ligase n=1 Tax=uncultured archaeon A07HR60 RepID=V4Y8C4_9ARCH
Acyl-coenzyme A synthetase/AMP-(Fatty) acid ligase {ECO:0000313|EMBL:ESS11173.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
AMP-dependent synthetase and ligase
sw_8_scaffold_186_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12100..12909)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI70_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45417.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_8_scaffold_186_14
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12956..13504)
DNA (549bp) protein (183aa)
metX; homoserine O-acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_00296}; EC=2.3.1.31 {ECO:0000256|HAMAP-Rule:MF_00296};; Homoserine O-trans-acetylase {ECO:0000256|HAMAP-Rule:MF_00296}; TaxID=268739 species="
Homoserine O-acetyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNU4_NATM8
sw_8_scaffold_186_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13569..14120)
DNA (552bp) protein (184aa)
metA; homoserine O-acetyltransferase (EC:2.3.1.31)
Homoserine O-acetyltransferase {ECO:0000255|HAMAP-Rule:MF_00296}; EC=2.3.1.31 {ECO:0000255|HAMAP-Rule:MF_00296};; Homoserine O-trans-acetylase {ECO:0000255|HAMAP-Rule:MF_00296}; Short=HTA {ECO:0000255
Homoserine O-acetyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=METX_NATPD
sw_8_scaffold_186_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14117..15403)
DNA (1287bp) protein (429aa)
metY_1; O-acetylhomoserine aminocarboxypropyltransferase 1, methionine synthase (EC:2.5.1.49)
O-acetylhomoserine aminocarboxypropyltransferase (Methionine synthase) {ECO:0000313|EMBL:CAI48233.2}; EC=2.5.1.49 {ECO:0000313|EMBL:CAI48233.2};; TaxID=348780 species="Archaea; Euryarchaeota; Halobact
O-acetylhomoserine aminocarboxypropyltransferase (Methionine synthase) n=2 Tax=Natronomonas pharaonis RepID=Q3IUE7_NATPD
sw_8_scaffold_186_17
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15744..17222
DNA (1479bp) protein (493aa)
aslA; arylsulfatase, choline-sulfatase (EC:3.1.6.6)
Arylsulfatase, choline-sulfatase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GZT8_9EURY
Arylsulfatase, choline-sulfatase {ECO:0000313|EMBL:ELZ77023.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM
sw_8_scaffold_186_18
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17227..18243
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1Z9_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47228.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_8_scaffold_186_19
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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18291..18665
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRM9_HALBP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ65705.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_8_scaffold_186_trna_1
unknown

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18714..18817
DNA (104bp)
transferRNA
sw_8_scaffold_186_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19338..20555)
DNA (1218bp) protein (406aa)
Peptidase M29 aminopeptidase II n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0H7_HALMD
peptidase M29 aminopeptidase II
Peptidase M29 aminopeptidase II {ECO:0000313|EMBL:ACV46959.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium muk
sw_8_scaffold_186_21
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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20636..21661
DNA (1026bp) protein (342aa)
Threonine aldolase (Fragment) n=1 Tax=halophilic archaeon J07HX5 RepID=U1MJL8_9EURY
Threonine aldolase {ECO:0000313|EMBL:ERG89684.1}; Flags: Fragment;; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
Threonine aldolase
sw_8_scaffold_186_22
unknown

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comp(21658..21792)
DNA (135bp) protein (45aa)

This feature has no annotations

sw_8_scaffold_186_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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21869..22663
DNA (795bp) protein (265aa)
ArsR family transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU63_NATPD
transcription regulator
ArsR family transcription regulator {ECO:0000313|EMBL:CAI48320.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas p
sw_8_scaffold_186_24
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22740..23282)
DNA (543bp) protein (181aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D253_9EURY
hypothetical protein
sw_8_scaffold_186_25
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23342..24289
DNA (948bp) protein (316aa)
Cation diffusion facilitator family transporter n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MST0_HALMO
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EMA48802.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
cation diffusion facilitator family transporter
sw_8_scaffold_186_26
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24475..24822
DNA (348bp) protein (116aa)
Zinc finger SWIM domain-containing protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XHX9_9EURY
Zinc finger SWIM domain-containing protein {ECO:0000313|EMBL:ELY61325.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococc
zinc finger SWIM domain-containing protein
sw_8_scaffold_186_27
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25078..25722)
DNA (645bp) protein (215aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278, ECO:0000313|EMBL:ELZ58576.1}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278, ECO:0000313|EMBL:ELZ58576.1};; IGP synth
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FEY8_9EURY
hisH; imidazole glycerol phosphate synthase subunit HisH
sw_8_scaffold_186_28

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25845..26861
DNA (1017bp) protein (339aa)
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XVQ8_9ARCH
Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein {ECO:0000313|EMBL:ESS04276.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67
phosphonate ABC transporter periplasmic phosphonate-binding protein
sw_8_scaffold_186_29
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26940..27764
DNA (825bp) protein (275aa)
phosphonate ABC transporter ATPase (EC:3.6.3.28)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales
Phosphonate ABC transporter, ATPase subunit n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D9Y8_HALXS
Displaying items 1-30 of 35 in total

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